Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2351 |
Symbol | |
ID | 5323212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2426114 |
End bp | 2427700 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791289 |
Product | FGGY-family pentulose kinase |
Protein accession | YP_001328018 |
Protein GI | 150397551 |
COG category | [C] Energy production and conversion |
COG ID | [COG1069] Ribulose kinase |
TIGRFAM ID | [TIGR01315] FGGY-family pentulose kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.400628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAT ATGTCGTGGC GGTCGATATC GGAACCGGCA GCGCCCGCGC GGGCGTGTTC GACGGGCGAG GCAGGCTTCT GGCGCGAGCC GACCAACCGA TTGCGATGAA TCGCCCGGAA GAAAACCACG CCGAGCACGA TTCCGAGGAC ATCTGGGCGG CGGTCTGCGG CGCGGTCAGA TCGGCGCGCG AGAAGGCGGC GGTGCCGGCG GAGAGCGTCG CTGCGATCGG CTTCGACGCC ACCTGTTCGC TCGTCGTGCG CGATCGTGAC GGCGCGCCGC TCTCGGTCAA TCGTCAGGGG GAGGCGCGCT GGGACACGAT CGTCTGGCTC GACCACAGGG CGCTGGCAGA AGCCGATTTC TGCACGGCGA CCAGGCATCA AGTTCTCGAT CATTCGGGAA AGGTGATGTC GCCCGAGATG GAAATGCCGA AGCTGATGTG GCTGAAGCGC AACCTTCCGC ACCAATGGGA AAAAGCAGGC TATTTCTTTG ATCTGGCGGA CTACATGTCT TGGCGGGCGA CCGGAAGTCC AGCCCGCTCG CGCTGTACTT TGACTGCCAA ATGGAACTAT CTCGCCCATG AGAAACGCGG CTGGCAGCAG GATTACCTGG AGCAGATCGG CCTTGAGGAC CTGCTCGCGC GCGGCGGCCT GCCCGAAGAG ACGCTGCCGG TGGAACGTGC CGTCGGACGC CTGAATGCCA GCGCGGCGGA AGAACTCGGG CTCGACGCGG AATGCCGGGT GGCGCCCGGG CTGATCGACG CCTATGCCGG GGCACTCGGC GTGCTCGGCG GCTTTGCGGG CGACAAGGCC AAGCTCGAAC GCCAGCTGGC ACTGATCGGC GGGACCTCGA GTTGCATCGT CGCCTTCTCC AAGGACATGA AGCCCGGCTT CGGCATGTGG GGCCCCTATT TCGAGGCGGT ATTGCCCGGG CTCTGGCTCA TCGAGGGCGG CCAGTCGGCG ACAGGCGCGC TGCTCGATCA TATTGTGCGG CTGCACGGAG GCGGGCTGCC CCCTACGACT GAAACCCATG CGAAGATCAT CGAGCGCGTA CAGGAATTGC GGGCGCTCCA TGGGGGCCCC GGTTTTGCCG ATCGTCTTCA CGTGCTCCCG GATTTTCACG GCAATCGTTC GCCCCTTGCC GACCCGCATG CTCTCGGCGT GATCAGCGGA CTGGCGCTCG ACTCTTCTTT CGATGCGCTG TGCCGCCTGT ATTGGCGGAC ATGCGTAGCG ATCGCACTCG GGATTCGCCA CATCCTGGAG ATGATGAAGG AAGTGGGCTA CGAACTCGAC ACGCTGCATG TGACCGGCGG GCATGTCCGC AACTCCCTGC TGATGGAGCT CTATTGCGAC GTCACCGGTT GCCGTGTGGT GGCACCCGAG ACTCCCGATG CCGTTCTGCT CGGCACGGCA ATGACGGCGG CAGTGGCCGG CAAGCTCTAT CCTGATCTCG CCAGCGCCGG ACCCGCAATG TCGTCGGCCG GAAAGGAGCG GCTGCCCGAT GCGACGCGCC GCAGGGATTA CGATCGCGAC TATCGGCGGT TCCTCGCGCT TTATCGACAT CGCGAGGAGC TGGAGTCGAT AGAATAA
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Protein sequence | MREYVVAVDI GTGSARAGVF DGRGRLLARA DQPIAMNRPE ENHAEHDSED IWAAVCGAVR SAREKAAVPA ESVAAIGFDA TCSLVVRDRD GAPLSVNRQG EARWDTIVWL DHRALAEADF CTATRHQVLD HSGKVMSPEM EMPKLMWLKR NLPHQWEKAG YFFDLADYMS WRATGSPARS RCTLTAKWNY LAHEKRGWQQ DYLEQIGLED LLARGGLPEE TLPVERAVGR LNASAAEELG LDAECRVAPG LIDAYAGALG VLGGFAGDKA KLERQLALIG GTSSCIVAFS KDMKPGFGMW GPYFEAVLPG LWLIEGGQSA TGALLDHIVR LHGGGLPPTT ETHAKIIERV QELRALHGGP GFADRLHVLP DFHGNRSPLA DPHALGVISG LALDSSFDAL CRLYWRTCVA IALGIRHILE MMKEVGYELD TLHVTGGHVR NSLLMELYCD VTGCRVVAPE TPDAVLLGTA MTAAVAGKLY PDLASAGPAM SSAGKERLPD ATRRRDYDRD YRRFLALYRH REELESIE
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