| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2318 |
|---|
| Symbol | |
|---|
| ID | 5323179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2398265 |
|---|
| End bp | 2399962 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640791256 |
|---|
| Product | adenine deaminase |
|---|
| Protein accession | YP_001327985 |
|---|
| Protein GI | 150397518 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1001] Adenine deaminase |
|---|
| TIGRFAM ID | [TIGR01178] adenine deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.793181 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG CGCTGGAGCG TCTCATAGAT CAGGGCGTGG GCCGCGGGCC GGCGGAAATC
GTGCTCAAGG GCGGGCGGTT CTTCGATCTC GTCACGGGGG AACTCGTTGC CTCCGACATC
GCCATCTCGG GTGGGCGTAT CGTCGGCACC TGCGGCGACT ATCAGGGCCG CGAGGAGATC
GACGTCACCG GCCGCGTCAT CGTGCCGGGC TTCATCGATA CGCATCTCCA CATCGAATCG
TCGCTGGTGA CGCCGCACGA GTTCGACCGC TGCGTGCTGC CGCTTGGTGT CACCACTGCG
ATCTGCGATC CGCACGAGAT CGCCAATGTG CTCGGCACCG AAGGCATCCA GTATTTCCTG
GATTCGGCCA TGGAGACGAT CATGGACATC CGCGTCCAAC TCTCCTCCTG CGTGCCGGCT
ACGCATCTCG AAACCTCGGG CGCCGACCTA CCGGTGGAGC GCCTTATCCC CTTTCGCAAC
CACCCGAAGG TGATCGGGCT TGCCGAGTTC ATGAATTTTC CGGGTGTCGT CAACAAGGAT
CCGATTTGCC TTGCAAAACT CGATGCCTTC CAGGATGGGC ATATCGACGG CCATGCCCCC
CTCCTTCGCG GAAAGGAACT GAACGGTTAT CTCGCGACCG GAATCCGCAC AGATCATGAA
TGCACAAGCG CGGGGGAAGC ACTCGAGAAA ATACGCAAGG GCATGCACAT CCTTGTGCGC
GAAGGTTCCG TCTCGAAGGA TTTGCAAGCG CTTATGCCTC TCATCACCGA GCGGCTCTCA
CCCTATCTGG CGCTCTGCAC GGACGACCGC AACCCGCTCG ACATTGCCGA ACAGGGCCAC
CTCGATCACA TGATCCGCAC CGCAATCGCG GCCGGCGTCG AGCCGCTCGC CATCTATCGC
GCCGCTTCGA TTTCAGCCGC ACGCGCCTTC GGCCTTCGCG ATCGCGGCCT CGTCGCTCCG
GGCTGGCGCG CCGACCTCGT CGTTATCGAC AGCCTGGAAG ACTGCAGGGC GGGAATCGTC
TTTTCCGCCG GACGGCGCGT CACGGATGCT CTCTTCGCAG AACGCCGGCC GGTAGAGCCG
GTGGGGCTCG ACAGCGTCAA GGCACGCAAG GTCCGGGCAG CCGATTTCGG TCTCCCCTAC
AACGAAGGAG AGACCCCGGT TCTGGGCGTT CTGCCCGGCA AGATCATCAC CGAACACCGC
CGCTACCGGC TACCCGCCGA AGGCAATCAA ACGGGTGTCG ATCTCGACCG TGACATCATC
AAGGTCGCCG TGATCGAGCG CCACGGCGTC AACGGCAATC ATGCCAACGG CTTCGTCCAG
GGCTTCGGCC TCAAGAAGGG TGCGATAGCG TCCACGGTCG GCCATGACAG CCACAACATC
TGCGTCGTGG GGGCCGGCGA CGAAGACATG GCGCTCGCAG TCAACCGATT AAGCGAAATC
AAGGGCGGCT TCGTCGTCGT CGAGGATGGC AAAGTCACTG GCGAGATCGC CCTGCCCGTC
GCCGGCCTCA TGAGTCTCGA ACCCTATGAG AGCGTCCGGG ATACGCTTCA CCATCTGCGT
CAGGCCGCCT TCGCCCTCGG TGCCACGCTG GAAGAACCAT TCCTGCAACT CGCCTTCCTG
CCGTTGCCGG TGATCCCCCA CCTGAAGATT TCGGATCGCG GGCTCGTGGA TGTGGACAGA
TTTATGCTGA TCGGGTGA
|
|---|
| Protein sequence | MSEALERLID QGVGRGPAEI VLKGGRFFDL VTGELVASDI AISGGRIVGT CGDYQGREEI
DVTGRVIVPG FIDTHLHIES SLVTPHEFDR CVLPLGVTTA ICDPHEIANV LGTEGIQYFL
DSAMETIMDI RVQLSSCVPA THLETSGADL PVERLIPFRN HPKVIGLAEF MNFPGVVNKD
PICLAKLDAF QDGHIDGHAP LLRGKELNGY LATGIRTDHE CTSAGEALEK IRKGMHILVR
EGSVSKDLQA LMPLITERLS PYLALCTDDR NPLDIAEQGH LDHMIRTAIA AGVEPLAIYR
AASISAARAF GLRDRGLVAP GWRADLVVID SLEDCRAGIV FSAGRRVTDA LFAERRPVEP
VGLDSVKARK VRAADFGLPY NEGETPVLGV LPGKIITEHR RYRLPAEGNQ TGVDLDRDII
KVAVIERHGV NGNHANGFVQ GFGLKKGAIA STVGHDSHNI CVVGAGDEDM ALAVNRLSEI
KGGFVVVEDG KVTGEIALPV AGLMSLEPYE SVRDTLHHLR QAAFALGATL EEPFLQLAFL
PLPVIPHLKI SDRGLVDVDR FMLIG
|
|---|
| |