| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2317 |
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| Symbol | |
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| ID | 5323178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2396850 |
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| End bp | 2398178 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791255 |
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| Product | omega amino acid--pyruvate transaminase |
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| Protein accession | YP_001327984 |
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| Protein GI | 150397517 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.414372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.544021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC GCCTGAATAC GACGCCGAAT GATTTGCGCG CATTCTGGAT GCCCTTCACG
GCCAACCGGC AGTTCAAGAA GGAGCCGCGG CTCTTCGTTG GCGCCAAGGA CATGTACTAC
ACCACCCATG ACGGACGGAC GGTTCTCGAT GGTACAGCCG GACTCTGGTG CGTCAATGCC
GGCCATTGTC GGCCGAAAAT CACCGAAGCG ATCCGCGAGC AGGCGGGCGA ACTGGACTAC
GCGCCGGCCT TTCAGCTCGG TCACCCCAAG GCATTCGAAC TCGCAAACCG GCTGGTCGAT
ATCGCGCCCG AAGGCATGAA CCACGTTCTC TACACCAATT CAGGCTCGGA ATCGGTCGAT
ACCGCGCTGA AGGTCGCGCT CGCTTATCAC CGCGCCAAGG GCAACGGCTC GCGCTTCCGC
CTCATCGGCC GCGAGCGCGG CTATCATGGC GTCAACTTCG GCGGCATTTC GGTTGGCGGG
ATCGTCGCCA ATCGCAAGAT GTTCGGCACG CTGCTGACGG GCGTCGATCA CCTTCCGCAC
ACGCATTTGC CAGCCAAAAA CGCCTTCAGC CGCGGCGAGC CCGAGCACGG CGCCGATCTC
GCCGCCGAAC TCGAGCGCAT CGTCACGCTT CATGACGCCT CGACGGTCGC GGCGGTCATC
GTTGAACCCG TGGCCGGCTC GACCGGCGTT CTCATCCCGC CGAAGGGCTA TCTTCAGAAA
CTGCGCGAAA TCTGCACCAA ACATGGCATC CTGCTGATCT TCGACGAGGT GATCACCGGC
TATGGCCGGC TCGGCACGCC CTTTGCCGCG CAATATTTCG ACGTCAAGCC GGACATCATT
ACCACCGCCA AGGGCCTCAC CAACGGCGTC ATCCCGATGG GCGCGGTCTT CGTGACATCG
GAAATCCACG ACGCCTTCAT GACCGGTCCG GAGCACCTGA TCGAGTTCTT CCACGGCTAT
ACCTATTCCG GCAACCCGAT CGCCTCGGCA GCAGCACTCG GAACGCTGGA CACCTACAAG
GAGGAAGGCC TTCTGACGCG CGCCGCCGAG CTTGCTTCCT ATTGGGAGGA GGCGTTGCAC
GCGCTGAAGG ACTGCCCCCA TGTCATCGAC ATCCGCAATA TCGGACTGAT CGGCGCGATC
GAGCTCGAGC CGATCGCCGG AGAGCCGACG AAGCGCGCCT TTTCCGCTTT CCTGAAGGCC
TATGAGAAGG GCCTTCTGAT CCGCACCACA GGCGACATCA TTGCGCTGTC ACCGCCGCTG
ATCATCGAAA AACAGCAGAT CGACGAGCTT TTCGACAAGC TACGCGACGT GCTGAAGAAC
AATATCTGA
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| Protein sequence | MSNRLNTTPN DLRAFWMPFT ANRQFKKEPR LFVGAKDMYY TTHDGRTVLD GTAGLWCVNA
GHCRPKITEA IREQAGELDY APAFQLGHPK AFELANRLVD IAPEGMNHVL YTNSGSESVD
TALKVALAYH RAKGNGSRFR LIGRERGYHG VNFGGISVGG IVANRKMFGT LLTGVDHLPH
THLPAKNAFS RGEPEHGADL AAELERIVTL HDASTVAAVI VEPVAGSTGV LIPPKGYLQK
LREICTKHGI LLIFDEVITG YGRLGTPFAA QYFDVKPDII TTAKGLTNGV IPMGAVFVTS
EIHDAFMTGP EHLIEFFHGY TYSGNPIASA AALGTLDTYK EEGLLTRAAE LASYWEEALH
ALKDCPHVID IRNIGLIGAI ELEPIAGEPT KRAFSAFLKA YEKGLLIRTT GDIIALSPPL
IIEKQQIDEL FDKLRDVLKN NI
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