Gene Smed_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2290 
Symbol 
ID5323151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2366234 
End bp2366812 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content63% 
IMG OID640791228 
ProductHupE/UreJ protein 
Protein accessionYP_001327957 
Protein GI150397490 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.202641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.223499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CCATCCTTAT CGCAGCCGCA CTCCTTTTCA CTTCGTCCGC GCCAGCCTTG 
GCCCATCTCG ATCCCGCAGA ACACGGGTCG CTGTTGGCGG GGCTTTCCCA TCCATTCTTC
GGCGCCGACC ACGTTCTGGC GATGGTTGCG GTCGGGCTTT GGGCCGCCCA GATCGGCGGC
AGGGCATTGT GGAGCGTGCC GGCTGCTTTC GTCACGACGA TGATGCTCGG CTTCGCTCTC
GCATTGCTTG GCGCTCCCCT GCCCTTTGTC GAACCAGCCA TTCTCGCCTC CGTCGTGGCG
CTCGGTCTGA TCGTCGCCAT GGCCGTCCGG CTCGATGTTT CGATGGCTGC GGCCGTCGTC
GCAGTCTTCG CGATTTTTCA CGGGCATGCA CATGGAGGAG AATTGGGGAA TGCCGGCGCC
TGGTCATTTG CAGCCGGCTT CTTGATCGCG ACCGTTCTCC TGCACATTGC GGGCCTGGGT
CTCGGCATGG GGCTTTCACG CCTTGCCAAC CGCGGCATCG TCGCTCGCAT TCTCGGCGGC
GTCACCGCTT TAGCCGGCGC GTCCCTGCTC TTCGGATGA
 
Protein sequence
MKKSILIAAA LLFTSSAPAL AHLDPAEHGS LLAGLSHPFF GADHVLAMVA VGLWAAQIGG 
RALWSVPAAF VTTMMLGFAL ALLGAPLPFV EPAILASVVA LGLIVAMAVR LDVSMAAAVV
AVFAIFHGHA HGGELGNAGA WSFAAGFLIA TVLLHIAGLG LGMGLSRLAN RGIVARILGG
VTALAGASLL FG