| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2287 |
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| Symbol | |
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| ID | 5323148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2363312 |
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| End bp | 2365042 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791225 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001327954 |
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| Protein GI | 150397487 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.282842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGA AATCGCATTC CATCAAGACC GGCATGCCCG ATGCGGCCGT GAAGTATCAG
CCATACCCGC AGATTGCGCT GCCGGATCGC ACATGGCCGT CCAAAGTCAT TGCCGAAGCA
CCGATCTGGT GTTCCGTGGA CCTGCGCGAC GGCAACCAGG CACTCGTCGA CCCGATGGGC
CACGATCGCA AGGCACGCAT GTTCCAACTC CTGCTGGACA TGGGCTTCAA GGAAATCGAG
ATCGGCTTTC CTTCCGCGTC GCAGACCGAT TTCGATTTTG CCCGCTGGTG CGTCGAGGAA
AGCAACGTCT CCGAAGACGT GTCTCTGCAG GTGCTGGTGC AGTGCCGGCC GGAGCTGATC
TCGCGCACCT TCGAGGCACT CGAAGGTGCG CACCGGCCGA TCGTGCACTT CTACAATTCG
ACGAGCGAAC TGCAGCGCCG TGTGGTCTTC GGCAAGGACG TCTCCGGGAT CAAGCAGATT
GCGACCGACG CCGCCAAGAT GATTACCGAC ATGGCCGCGA AAGCGGGCGG CGGATATCGC
TTCGAATATT CGCCGGAAAG CTTCACCGGT ACCGAGCTGG AAGTGGCGTT GGAGATCTGC
AACGCGGTGA TCGAAATCGT CCGGCCGACA CAGGACAACA AGCTCATCAT CAATCTGCCG
TCGACGGTCG AAATGGCGAC GCCGAACATC TATGCCGATC AGATCGAATG GATGTGCCGC
AATCTCGACA ATCGCGAGAA CCTGCTCATC TCACTGCACC CGCACAACGA TCGTGGCACG
GGCATTGCTG CTACGGAACT CGGTCTGATG GCCGGCGCCG ACCGGGTCGA AGGGACGCTC
TTCGGCAATG GAGAGCGCAC CGGAAATGTC GATGTGGTGA CGCTGGCGCT CAATATGTTC
ACGCAGGGCG TCGACCCCAA GCTCGACTGC TCGGACATAG AGCGGATCAA GGAGGTCTAC
GAATATTCCA ACCAGATGGT CATTCCGGAA CGGCACCCTT ACGTAGGGGA GCTGGTGTAC
ACCGCCTTCT CGGGCTCGCA TCAGGACGCC ATCAACAAGG GCATGAAGGC GATCAAACAG
GCGAACAAGC CGGTCTGGGA GGTCCCCTAC CTGCCGATCG ACCCGCGTGA CGTCGGGCGC
AGCTACGAAG CGATCATCCG CATCAACTCG CAATCGGGCA AGGGCGGCAT CGCCTATATC
CTGCAAGAGG ATTACGGTAT CAATCTGCCC CGCAATCTCC AGATCGAGTT TCGCGAGGAG
ATTCAGCGCA TCACCGACGA GGAGGGAAAG GAGCTGCCCT CGAAGCGCAT CCATCAGCGC
TTCATCGAAA GCTATGTCGA CCAGCCGGGC GCCCGTATCA AGTTCGTCGA CCACCACACC
TATCCGGTGG GCGAACACAA GGGCCTGCGC GTCGTTGCCG CGGAAATTAC GGATCGCGGC
GAGACACGCC AGATCGAAGG CAAGGGCACG GGCCCGATCG ACGGCTTCAT CAATGCGTTG
TCGATCTATC TCGGCATCGA ACTTTCGGTG GCGGATTATT CCGAGCATTC GCTGCAGCAT
GGCTCGAACG CGGCTGCGAT TGCCTATGTG GAGGTCGAGT ATCCCGGCGG AAAACTCTTC
GGCGTCGGCA TCAACACCAA TATCGTCGCC GCCTCCCTGG AGGCGATCGT CTCGGCTGCA
AACCGGGTGT TGGACGTCAT GGGAAGTGAC GCGCTTGCGC AATCACGCTA G
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| Protein sequence | MILKSHSIKT GMPDAAVKYQ PYPQIALPDR TWPSKVIAEA PIWCSVDLRD GNQALVDPMG
HDRKARMFQL LLDMGFKEIE IGFPSASQTD FDFARWCVEE SNVSEDVSLQ VLVQCRPELI
SRTFEALEGA HRPIVHFYNS TSELQRRVVF GKDVSGIKQI ATDAAKMITD MAAKAGGGYR
FEYSPESFTG TELEVALEIC NAVIEIVRPT QDNKLIINLP STVEMATPNI YADQIEWMCR
NLDNRENLLI SLHPHNDRGT GIAATELGLM AGADRVEGTL FGNGERTGNV DVVTLALNMF
TQGVDPKLDC SDIERIKEVY EYSNQMVIPE RHPYVGELVY TAFSGSHQDA INKGMKAIKQ
ANKPVWEVPY LPIDPRDVGR SYEAIIRINS QSGKGGIAYI LQEDYGINLP RNLQIEFREE
IQRITDEEGK ELPSKRIHQR FIESYVDQPG ARIKFVDHHT YPVGEHKGLR VVAAEITDRG
ETRQIEGKGT GPIDGFINAL SIYLGIELSV ADYSEHSLQH GSNAAAIAYV EVEYPGGKLF
GVGINTNIVA ASLEAIVSAA NRVLDVMGSD ALAQSR
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