Gene Smed_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2280 
Symbol 
ID5323141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2357839 
End bp2358399 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID640791218 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001327947 
Protein GI150397480 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.615584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC ACGATCTCGT CTATCTGACC GAAGACGCAT CCCACGACCC AGCCATCGAA 
GTCATCAATG AAGAGGCCTT CGGCCCGGGT CGCTTCGCCC GCGCCGCCGC ACGGATTCGC
GAGCAGGGGC CGCATGACCG GTCGCTCTCC TTTATCTGCG CCGATGACGG CGAAACGATA
GCGTCGGTGC GGATGACAGC GGTAACGGCC GGTTCCGTGA AAGGACACCT GCTCGGCCCT
CTCGCTGTCC GGCCCTCGCA CAAGAACAAG GGCATCGGCC GGGAACTGGT CCGCATTGCA
GTGGATGCGG CGCGTCGGAG GGGCTCCGAA GCGGTTATCC TCGTCGGCGA TCCGCCCTAT
TACCAGCCAC TCGGTTTCGA GAAGGTCCGT CACGGAGCTC TCGAATTTCC GGGTCCCGTC
GATCCGGCGA GGGTTCTCGT CGTGCCGATG GCGCCGGACG TCCACGCGCG GCTCGCGGGC
GTGATCGCCT GGCGGGATGA CGGTGCTGCG CCTGATGCCG GCTTCGCCAC GCGGTCGGAA
GCGCAAGGGG CGGCTGCCTG A
 
Protein sequence
MKKHDLVYLT EDASHDPAIE VINEEAFGPG RFARAAARIR EQGPHDRSLS FICADDGETI 
ASVRMTAVTA GSVKGHLLGP LAVRPSHKNK GIGRELVRIA VDAARRRGSE AVILVGDPPY
YQPLGFEKVR HGALEFPGPV DPARVLVVPM APDVHARLAG VIAWRDDGAA PDAGFATRSE
AQGAAA