| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2164 |
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| Symbol | |
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| ID | 5323024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2233979 |
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| End bp | 2235424 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791102 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327832 |
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| Protein GI | 150397365 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGAGA AGGAGAAAGA CCTCATTGGC GCATTCCTGC GCGGAGAGGT GGACCGTCGC
GGCCTGTTGA AGGGCCTTGG CGCGGCAGGC CTGACGGCGG GCACCGCCGG CACCCTGTTC
AACATGATGT CGACCCAGGC CCTTGCTGCC GACTTCGACT GGAAGGCACA TTCCGGCAAG
TCGCTGAAAC TGTTGCTGAA CAAGCATCCT TACGCGGATG CGATGATTGC CAATCTGCAG
GCGTTCAAGG ACCTTACCGG TATCGAAGTC ACCTATGACG TCTTCCCGGA GGACGTCTAT
TTCGACAAGG TGACGGCGGC GCTTTCTTCC GGCTCGTCGG AATACGACGC CTTCATGACC
GGCGCTTACA TGACCTGGAC CTACGGGCCG GCCGGCTGGA TCACCGACCT CAATGAATGG
ATCAAAGATC CGTCGAAGAC CAATCCGCAA TATGGCTGGG ACGACTTCCT GCCGGGCGTC
AAGGCATCCT GCGCCTGGAA CGGTCAGCCG GGCGGCGCGC TCGGTTCGGA AGATGCCAAG
CAGTGGTGCA TTCCGTGGGG CTACGAGCAG AACAATCTCT CCTATAACCA GGAAATGTTC
GAAAAGGCCG GCGCCAGCGT TCCGAAGAAC CTCGATGAAC TCGTCGCTAC GGCGGCAAAG
CTCAACAAGG ATGTCGGCGG CGGTGTCTAC GGCATCGGCG TGCGTGGTTC CCGTTCCTGG
GCAACCATTC ATCCGGGTTT CCTCTCCGGC TACGCCAATT TCGGCCAGAA GGATCTGAAC
GTCTCGGAGG ACGGCAAGCT TTCGGCCGCG ATGAACACGG CGGAGTCCAA GTCCTTCCAC
GCCAAATGGG TGCAGATGAT CCAGGAAAGC GGCCCCAAGG ACTGGTCGAC CTATACCTGG
TATCAGGTCG GCACCGACCT CGGCGCCGGC GCTTCCGCCA TGATCTACGA CGCCGACATC
CTCGGCTATT TCATGAATGG CGGCGACAAC AAGATGGCCG GCAAGCTCGC TTACGCGCCC
TTTGCCGCCA ACCCTGAGGC GAAGGCTCCT ACGCCGAACA TCTGGATCTG GTCGCTGGCC
ATGTCCAATT TCGCGAAGGA TAAGGATGCG ACCTGGTATT TCCTGCAATG GGCATCGGGT
CTCGAGCACG CGATCTTCGG CGCAACCAAG ATGGACTTCG TCAACCCGGT CCGGGCATCC
GTCTGGAAGG ACGAGATCTT CCGGGAGCGG CTGAACAAGA GCTATCCCGG TTATGTGGAG
ATGCACGACG TTTCGGCGCC GGGCGCGAAG ATCCACTTCA CCGCCCAGCC TCTCTTCTTC
GATCTCACCA CCGAATGGGC GGCGACGCTG CAGAAGATGG TGGCGAAGGA AGTGCCGGTC
GACGAAGGTC TCGACAGGCT TGCCGAGAGC ATCAACCGGC AACTTGCGGA AGCCGGGCTC
GGCTGA
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| Protein sequence | MYEKEKDLIG AFLRGEVDRR GLLKGLGAAG LTAGTAGTLF NMMSTQALAA DFDWKAHSGK
SLKLLLNKHP YADAMIANLQ AFKDLTGIEV TYDVFPEDVY FDKVTAALSS GSSEYDAFMT
GAYMTWTYGP AGWITDLNEW IKDPSKTNPQ YGWDDFLPGV KASCAWNGQP GGALGSEDAK
QWCIPWGYEQ NNLSYNQEMF EKAGASVPKN LDELVATAAK LNKDVGGGVY GIGVRGSRSW
ATIHPGFLSG YANFGQKDLN VSEDGKLSAA MNTAESKSFH AKWVQMIQES GPKDWSTYTW
YQVGTDLGAG ASAMIYDADI LGYFMNGGDN KMAGKLAYAP FAANPEAKAP TPNIWIWSLA
MSNFAKDKDA TWYFLQWASG LEHAIFGATK MDFVNPVRAS VWKDEIFRER LNKSYPGYVE
MHDVSAPGAK IHFTAQPLFF DLTTEWAATL QKMVAKEVPV DEGLDRLAES INRQLAEAGL
G
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