Gene Smed_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2137 
Symbol 
ID5322997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2203783 
End bp2204844 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID640791075 
ProductABC transporter related 
Protein accessionYP_001327805 
Protein GI150397338 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCC TGCAACTGAC CAATATTCAG AAATCTTTCG GCCCGGTTCA GGTCGTGCAT 
AATTTCGACA TGGGGATCGA CAAGGGCGAG TTCGTTTCCT TCCTCGGCCC ATCCGGCTGC
GGCAAGACAA CCATTCTGCG CATGATAGCC GGCTTCGAGA CGCCTTCGGG CGGGACGATT
TTCATCGACG GCAAGGACCA GGGCGCGCTG AAGCCTAACC AGCGCAATAT CGGCATGGTG
TTTCAGGCAT ATGCCCTCTT CCCGAACATG AACGTGCACG ACAATGTCGC TTTCGGTCTC
AAGGTTGCGG GCGATTCGAA ACCGGAGATC GATAAACGGG TGAAGCAGAT GCTCGGGCTG
ATCAAGCTCG AGCATCTGGC GGACCGCTTC CCCTATCAAC TCTCCGGCGG CCAGCAGCAG
CGCGTGGCAC TTGCCCGAGC ACTGGCCGTC AAGCCGCAGG TGCTTCTGCT CGACGAGCCG
CTTTCCGCAC TTGACGCGAA GATTCGCGTT TCTCTGCGCG AGGAAATTCG TCAGATTCAG
CAACAGCTCG GCATCACCAC CGTATTCGTG ACGCACGACC AGGAGGAAGC CCTGTCGATT
TCCGACCGGA TCGTCGTCAT GAATGCCGGC CGCGCCGACC AGATCGGCAC TCCGTTCGAG
ATCTACAACA CCCCGGCGAC GCGCTTCGTC GCCTCCTTCG TCGGCACGCT CAACATCATC
GAGGGTAAGG TGGCCGATCC CGCAATCGGC GCGGTCACCA TCGGCGGCCA GCAGATTTCG
CTGAGCGAGC CGATAACAGG GGCAAAGGGC GGCGACAGCA TTTCGCTGGC ACTCAGGCCG
GAAGCGGGCT CGATCGCCGA GGGCGCGCGG GGCGATACCG CACTTCCGGG CAAGGTCGTA
TCGAGGAGCT TTCTCGGCTC CGTCATCCGC ACCAAGCTGC GGGTCGGCGA GGACATCATC
TCCTTCGATA TGTTCAATGA CCCGGGCATG ATACCGCCCG TTGCCGGGGA AAGCGTCACG
CTTCGCTTCG CGGCAAAGGA CCTGCTCGTC ATCCGCGAAT AG
 
Protein sequence
MAFLQLTNIQ KSFGPVQVVH NFDMGIDKGE FVSFLGPSGC GKTTILRMIA GFETPSGGTI 
FIDGKDQGAL KPNQRNIGMV FQAYALFPNM NVHDNVAFGL KVAGDSKPEI DKRVKQMLGL
IKLEHLADRF PYQLSGGQQQ RVALARALAV KPQVLLLDEP LSALDAKIRV SLREEIRQIQ
QQLGITTVFV THDQEEALSI SDRIVVMNAG RADQIGTPFE IYNTPATRFV ASFVGTLNII
EGKVADPAIG AVTIGGQQIS LSEPITGAKG GDSISLALRP EAGSIAEGAR GDTALPGKVV
SRSFLGSVIR TKLRVGEDII SFDMFNDPGM IPPVAGESVT LRFAAKDLLV IRE