| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2079 |
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| Symbol | |
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| ID | 5322938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2135064 |
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| End bp | 2136374 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791016 |
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| Product | major facilitator superfamily metabolite/H(+) symporter |
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| Protein accession | YP_001327747 |
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| Protein GI | 150397280 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.611047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0017507 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGACG CGACAACCTC GCTGTCGCCG CAGGATGGTG CGTTGCATCG ACAGGCCGTG
AACTCCCCGG CCCGGGTGCT GTTCGCCAGC CTCGTCGGCA CGACGATCGA ATTCTTCGAC
TTCTATGTCT ATGCGACAGC AGCGGTGATT ATTTTCCCGC ACCTTTTCTT CCCTGCAGCT
GATCCGACCT CGGCAATGCT GCAGTCCTTG GCGACTTTCT CGATCGCCTT TTTCGCCCGT
CCCCTTGGCG CCGTGATCTT CGGCCACTTC GGCGACAGGA TCGGCCGCAA GGCGACGCTC
GTCGCCGCGC TGATGACTAT GGGGATTTCG ACGGTCGTGA TCGGCCTGCT GCCCACCTAC
GCGACGATTG GCGTCGTGGC GCCGCTTCTC CTTGCGCTCT GCCGCTTCGG CCAGGGCCTG
GGCCTCGGCG GTGAATGGGG CGGCGCGGTG TTGCTAGCGA CCGAGAATGC GCCGGAAGGC
AAGCGGAGCT GGTATGCAAT GTTCCCCCAG CTCGGCGCGC CGATCGGCTT CATCCTGTCG
GCCGGGACCT TCCTCGTGCT CGGCGAGGTC ATGAGCGACG AGGCCTTCCT CGCCTGGGGC
TGGCGAATTC CCTTCGTCGC CAGCGTGCTG CTCGTGATCG TCGGTCTCTA TGTCCGCCTG
AAGATTACCG AAACGCCGGA ATTCCAGAAG GCAATCGATA AACGGGAGCG CGTCGAGGTA
CCGGTGGCGG CGATATTCCG CTCGCATAAG CGAAGCCTCG CGCTCGGCAC CTTCGTGGCA
CTCGCGACCT TCGTCCTGTT CTATCTGATG ACCGTCTTCT CGCTCTCCTG GGGCACGACG
AAGCTCGCCT ATTCGCGCGA GCAGTTCCTG CTTGTACAGA TGACCGGCGT CGTTTTTTTC
GGCCTGATGA TTCCCGTCTC CGGCATTCTT TCGGACCGCT TCGGACGCCG CCTGGTGCTG
GTGCTCACAA CAATCGGCAT CGGCATATTC GGCCTCGTCA TGGCGCCGCT TCTGACATCC
GGTCTCGGCG GCGCCTTCGT CTTCTCGATC CTCGGACTCG GCCTGATGGG CCTTACCTAC
GGGCCGATCG GCGCGGCGCT GGCGGCTCCC TTTCCGACTG CAGTGCGTTA TACCGGCGCC
TCGATGACCT TCAACCTCGC AGGCATCTTC GGCGCGTCGC TGGCACCCTA CATCGCCACC
TGGCTCGCGA CCAACTACAG CCTCGGCCAT GTCGGCTATT ATCTGATGGG CGCCGCATTG
ATCACGCTCG TCTGCCTGCT GCTTTCGAAC GAGGAAGAGG TCTCGGGCTG A
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| Protein sequence | MTDATTSLSP QDGALHRQAV NSPARVLFAS LVGTTIEFFD FYVYATAAVI IFPHLFFPAA
DPTSAMLQSL ATFSIAFFAR PLGAVIFGHF GDRIGRKATL VAALMTMGIS TVVIGLLPTY
ATIGVVAPLL LALCRFGQGL GLGGEWGGAV LLATENAPEG KRSWYAMFPQ LGAPIGFILS
AGTFLVLGEV MSDEAFLAWG WRIPFVASVL LVIVGLYVRL KITETPEFQK AIDKRERVEV
PVAAIFRSHK RSLALGTFVA LATFVLFYLM TVFSLSWGTT KLAYSREQFL LVQMTGVVFF
GLMIPVSGIL SDRFGRRLVL VLTTIGIGIF GLVMAPLLTS GLGGAFVFSI LGLGLMGLTY
GPIGAALAAP FPTAVRYTGA SMTFNLAGIF GASLAPYIAT WLATNYSLGH VGYYLMGAAL
ITLVCLLLSN EEEVSG
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