Gene Smed_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2019 
Symbol 
ID5322878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2069156 
End bp2069719 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID640790956 
Productdihydrofolate reductase 
Protein accessionYP_001327687 
Protein GI150397220 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA CAGAACGGAA CCCGGCGATC TTACCGAAGA TCGTTATCGT CGTCGCCGTC 
GCGTTGAACG GGGTCATCGG CCGCGAGGGC GATCTCCCCT GGCGGCTGCC GACCGATCTC
AAACGCTTCA AGGCACAAAC GATCGGCAAG CCGGTCATCA TGGGGCGGAA GACCTGGGCG
GCAATCGGCA GGCCGCTGCC CGGCCGGCCG AACATCGTCG TCACCCGCAA TCGCGCCTTC
GAGGCTCCCG GAGCCGAGGT CGCGCCCTCC CTCGAGGCGG CTCTTGCGGT CGCACGGGAG
CGGGCGGCGG CGATTGGGGC CGATGAGATT TGCGTTATCG GCGGCGGCGA GATCTACCGC
CAGTCAATCG GCATGGCCGA TGTCCTCCAC GTTACCGAAG TGCAGGCCGA AGTGGATGGC
GACACACGCT TCCCCGAGAT CGACCCGGCG GTTTTCGAAA AGGTGCTCGA AGAAGACCTG
CAAAGCGGCG AGAAAGACAG TCACGCTATG CATTTCGTGA CCTGGCGGCG CCGTACTGCG
CCGTCGCAGG AGACCGGGGC CTGA
 
Protein sequence
MTETERNPAI LPKIVIVVAV ALNGVIGREG DLPWRLPTDL KRFKAQTIGK PVIMGRKTWA 
AIGRPLPGRP NIVVTRNRAF EAPGAEVAPS LEAALAVARE RAAAIGADEI CVIGGGEIYR
QSIGMADVLH VTEVQAEVDG DTRFPEIDPA VFEKVLEEDL QSGEKDSHAM HFVTWRRRTA
PSQETGA