Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1964 |
Symbol | |
ID | 5322823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2015580 |
End bp | 2016170 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790902 |
Product | transglutaminase family protein cysteine peptidase BTLCP |
Protein accession | YP_001327633 |
Protein GI | 150397166 |
COG category | [S] Function unknown |
COG ID | [COG3672] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.491162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.52328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGTCG TTGGAGAACG CCTCGTGAAA CGCTTCATTG CGCAGACAGT CTTTTTGTTG CTTATTGGAG CCCCGGGGGC TGCAGATGCC GGTACAACCA TGAGGACTTC CGGCAAGGCT TTCGCACCGC CCGCCTTCGC ATCTTTCTGC GTCCGCGAGC CACGCCTCTG CAGCACAGGC GGCGGCGAAA AGGCGGTCGT TCTTGCTCCG GATAAAATCA GCCAGCTCAA ACAGATCAAC AGCGCCGTCA ATGCGAGCAT CCGCGAACGC AGCGACCGCG CAAACGTCGG CAAGGACGAT GACTGGCGCG TGCCGACCGC TTACGGAGAC TGCGAGGACT TCGCAATCCT CAAGAAGCGA GAGCTGTTGA AGCGCGGCTG GCCCGCATCG GCACTGCTAC TCACGGTTGC GCTCTTTCGT GGGGAGGGCC ACACGGTTCT CACCGTCCGC ACGAGCGAAG GTGACCTGGT TCTCGACAAC AGGACCAATT CGGTCAGAGA TTGGTCACGC ACCCCTTATA ATTATTTCGC CCGGCAATCC CAGTCGAACG GCAGGCGGTG GGAACTGATC GCAGGTGCCC GAAATATCTG A
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Protein sequence | MPVVGERLVK RFIAQTVFLL LIGAPGAADA GTTMRTSGKA FAPPAFASFC VREPRLCSTG GGEKAVVLAP DKISQLKQIN SAVNASIRER SDRANVGKDD DWRVPTAYGD CEDFAILKKR ELLKRGWPAS ALLLTVALFR GEGHTVLTVR TSEGDLVLDN RTNSVRDWSR TPYNYFARQS QSNGRRWELI AGARNI
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