Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1918 |
Symbol | |
ID | 5322776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1976224 |
End bp | 1976940 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640790855 |
Product | putative phage repressor |
Protein accession | YP_001327587 |
Protein GI | 150397120 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.514362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACC CACAATATGA ACTGAAACAA TGGCTTGCAG AAAAACTCGC GGCTCGCGGC GTGGCTTCGA AACTCGCCGA AGCTACGGGT ATGTCCAACG ACAAGATCAC GCGGTCAAAA GAACTGCACA GCGACGATCC TAAGAAGCGC CGTCAGATAT CTCTCCAAGA GATAGAGGCG ATGGCGAGAT TCTTTAGGGA ATTGCCGCCT GGCTTCGAAC AAATGACGCG TTGGTTAGAG GATCTGTCCC CCGCCCCCAC GGCCAAGCCG ATACCAAACG CCAGCTTCCC GCCGCGCTGG CAGCAATTCC CCGGCGATGC TTCGATTCCG CTTCGAGGGC ACATTGCCGC CGGAGCCAAC GGTCGGTTCA TTATGAACGG TCAGGATATC GCCACGGTTT TTTGTCCGCC CGGCCTCGAG GGCGTTGAGG GCGCGTATGC CGTGCAGGTC GACGGCCGCT CCGGCGAGCC ACGCTTCCTT CACGGCGAGA CCGCGTGGGT GAACCCTCAT CAGAAGGTCC GACAGGGCGA CGATGTCGTA GTGCAGATCC TGGAAGACGA TGAGCTATCA AGCTACCTCA AGCGGTTCGT TTCCAGATCC GCCGATGTGC TTCGCCTCTA CCAGTACAAC CCCGGCAAAG GCGAAAGCCA CGATCTGGAG TTTCCTACGG ACAAAGTTTT CAGCGTCCAC AAAGTTGTGT TTCATGCGAT GCTTTGA
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Protein sequence | MSDPQYELKQ WLAEKLAARG VASKLAEATG MSNDKITRSK ELHSDDPKKR RQISLQEIEA MARFFRELPP GFEQMTRWLE DLSPAPTAKP IPNASFPPRW QQFPGDASIP LRGHIAAGAN GRFIMNGQDI ATVFCPPGLE GVEGAYAVQV DGRSGEPRFL HGETAWVNPH QKVRQGDDVV VQILEDDELS SYLKRFVSRS ADVLRLYQYN PGKGESHDLE FPTDKVFSVH KVVFHAML
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