| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1768 |
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| Symbol | |
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| ID | 5322626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1852183 |
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| End bp | 1853229 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790706 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001327438 |
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| Protein GI | 150396971 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0444369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTC ACGCAATCGA GGTGAAAAAC CTCTACAAGA TTTTCGGCCC CCGCGGCGAG
GATTACGTTA AACTCGTCGA GAAGGGGATG GGCAAGGCCG AACTCAACGA AAAACATGGT
CACGTGCTCG GGCTGCAGGA TATCAACATC TCCATGCCCG GCGGTTGCAT AACGGTCGTG
ATGGGCCTGT CCGGTTCCGG CAAATCGACG CTGATCCGAC ACATAAACCG GCTGATCGAT
CCGACCGCCG GAGAGGTCCT CTACGACGGC GTGGACGTCT GCAAGATGAA CGAGAACGAC
CTTCGCTCGT TCCGCCGCCA CAAGACGGCC ATGGTATTCC AGAAATTTGC GCTGCTGCCG
CACCGCACCG TTCTCGAAAA CACAATCTAC GGCCTGGAAA TCCAGGGTAT TGACCGGCGC
GAAAGCGAAA AGCGTGCGCT TGGGTGGATC GATCGCGTCG GCCTTCAGGG TTTCGAGAAG
CATTATCCGA ACCAGCTTTC CGGCGGTATG CAGCAGCGCG TCGGCCTTGC CCGCGCGCTG
ACAAACGACG CCGACATCCT GCTGATGGAC GAGGCCTATT CGGCACTCGA TCCGCTGATC
CGCGTCGATA TGCAGTCCGT GCTGCTCGAA TTGCAAAAGG AACTGAAGAA AACCGTGGTC
TTCATCACCC ACGATCTCGA CGAGGCCCTG AGGCTCGGCG ACAAGATCGC GATCCTGCGC
GACGGGCACG TCGTGCAGCA GGGAACGGGT CAGGAGATCG TCCTGTCGCC GGCTGATGAC
TACATCACAG CCTTCGTACA AGAAGTGAAT CGCGGGCGGG TTATCAATGT CGAGACAATC
ATGCGACCGC TCTCCGGCAA TCCGGAAGGT CTGTCGCTCG CCGCAGGCAC CGTGCTCGAA
ACCGCTGCAC GCACGATGAC CGGTGCCCAC ATCAGCAACG CGCATGTCGT TGACGCCAAC
GGGCGACCGA TCGGCGCGAT CGACCTGCAG ATGATCATTT CCGCCATGGT GACGCCGGTA
AAGCATACTG ATCTGCAGGC GGCTTGA
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| Protein sequence | MASHAIEVKN LYKIFGPRGE DYVKLVEKGM GKAELNEKHG HVLGLQDINI SMPGGCITVV
MGLSGSGKST LIRHINRLID PTAGEVLYDG VDVCKMNEND LRSFRRHKTA MVFQKFALLP
HRTVLENTIY GLEIQGIDRR ESEKRALGWI DRVGLQGFEK HYPNQLSGGM QQRVGLARAL
TNDADILLMD EAYSALDPLI RVDMQSVLLE LQKELKKTVV FITHDLDEAL RLGDKIAILR
DGHVVQQGTG QEIVLSPADD YITAFVQEVN RGRVINVETI MRPLSGNPEG LSLAAGTVLE
TAARTMTGAH ISNAHVVDAN GRPIGAIDLQ MIISAMVTPV KHTDLQAA
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