| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1721 |
|---|
| Symbol | |
|---|
| ID | 5322579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1800176 |
|---|
| End bp | 1801204 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640790659 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001327391 |
|---|
| Protein GI | 150396924 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.361877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGC AACCGGCGGA AAATCGATAC GAGAAGATGA AGTATAATCG CTGCGGCAGG
AGCGGCTTGA GGCTGCCGGC GATTTCCCTG GGCCTTTGGC ACAATTTCGG CGACGACACG
CCGCACGAGC GTAAGGTTGA CATGTGTCGC ACGGCGCTCG ACCTCGGCAT CACGCATTTC
GATCTGGCCA ACAATTACGG CCCGCCGCCG GGCACCACCG AAACCGCCTT CGGCGAAATT
ATGCGCAGTG ATTTCAGCGG CCTGCGCGAC GAACTCATCA TCTCGTCCAA GGCCGGCTAT
TACATGTGGC CCGGCCCCTA TGGCGAGTGG GGCAGCCGCA AATATCTTAT CGCCTCCTGC
GACCAGAGCC TGAAACGCAT GGGGCTCGAC TATGTCGACA TCTTCTACTC CCATCGCTTC
GATCCGGAAA CGCCGCTCGA AGAAACCTGC GGAGCGCTCG ACCACATCGT TCGCTCGGGA
CGTGCGCTTT ATGTCGGCAT TTCCTCGTAC AATTCGCAGC GCACGCGCGA GGCGGCGGCG
ATCCTGAAAG AGCTGGGTAC GCCCTGTATT ATCCACCAGC CGAGCTATTC GATGCTCAAC
CGATGGATCG AGGACGACGG CCTCGTGGAC ACGCTGGAGG AGCTCGGCAT CGGTTCGATC
GTCTTTTCGC CGCTGGCTCA GGGCATGTTG ACGACAAAGT ACCTGAACGG CATTCCCGAG
GACAGCCGCG CAGCGCAGAA CCACTTCCTC AAGAAGGAGT TCATCCGTCC GGCGATCATC
GACAACATCC GCAAGCTGAG CGCCATCGCC GAACGGCGCG GCCAGACACT CGCCCAGATG
GCGCTCGCCT GGGTGCTGCG CGGCGGCCGC ATCACCTCGG CGCTGATCGG CGCCAGCCGT
TCCGCGCAGA TTATCGATTG CGTGAAGGCA CTGGAAAACG ACAGTTTCAC AGCAGAGGAA
CTGAGCGAGA TCGATCTTTA CGCGCGCGAG GCCGACGTGA ATCTCTGGGC TAAGTCTGCG
GAGCTTTGA
|
|---|
| Protein sequence | MAWQPAENRY EKMKYNRCGR SGLRLPAISL GLWHNFGDDT PHERKVDMCR TALDLGITHF
DLANNYGPPP GTTETAFGEI MRSDFSGLRD ELIISSKAGY YMWPGPYGEW GSRKYLIASC
DQSLKRMGLD YVDIFYSHRF DPETPLEETC GALDHIVRSG RALYVGISSY NSQRTREAAA
ILKELGTPCI IHQPSYSMLN RWIEDDGLVD TLEELGIGSI VFSPLAQGML TTKYLNGIPE
DSRAAQNHFL KKEFIRPAII DNIRKLSAIA ERRGQTLAQM ALAWVLRGGR ITSALIGASR
SAQIIDCVKA LENDSFTAEE LSEIDLYARE ADVNLWAKSA EL
|
|---|
| |