| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1710 |
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| Symbol | |
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| ID | 5322568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1787907 |
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| End bp | 1789532 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790648 |
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| Product | Alpha-N-arabinofuranosidase |
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| Protein accession | YP_001327380 |
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| Protein GI | 150396913 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.783601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA CAATCCGCAA TCCGGTTCTG CCGGGCTTCA ATCCAGACCC ATCCATCTGC
CGGGTCGGTG ACGATTATTA CATCGCGACC TCGACATTCG AATGGTATCC AGGCGTACAG
ATCCACCATT CGCGCGACCT CGTGAACTGG CGGCTGGTGC GTCGTCCGCT CGAGCGGGCA
AGCCAGCTCG ACATGCGCGG CAATCCCGAT AGCTGCGGCG TGTGGGCGCC GTGCCTCTCC
TATTGCGACG GGCTGTTCTG GCTGGTCTAT ACCGACGTCA AGCGCCTGGA CGGCAACTTC
AAGGATGCGC ACAACTATAT CGTGACGGCG GAGGCGGTGG AGGCCACCTG GTCCGACCCG
GTCTATGTGA ACTCGTCGGG TTTCGATCCG TCGCTCTTCC ACGATGATGA CGGCCGCAAG
TGGTTTCTCA ACATGCAGTG GAATCACCGC ACCGAAAGCT TCGGCGGCTC GCCCAAGAGC
CCCGCATTCG ACGGTATTCT GCTGCAGGAA TGGGACGAGC GGACCCGCAA GCTCGTGGGA
CCGGTGAAAA ACATCTTCGC CGGCAGTCCG CTCGGCCTTG TCGAAGGTCC GCATCTCTTC
AAACGCGACG GCTGGTATTA TCTCACGGTC GCGGAGGGAG GAACCGGTTA CGACCACGCC
GTTGGAATGG CACGATCCCG TACGATCGAT GGCCCCTATG AGATGCACCC GAACGTTCAT
CTCATCACTT CCAAGGATCA CCCGGAGGTG GCTCTGCAGC GTGCGGGGCA CGGCCAATAT
GTCGAGACGC CGGACGGGCA GGCCTATCAT ACGCATCTAT GCGGCCGTCC GCTGCCGCCG
CTGCGCCGCT GCACGCTGGG GCGCGAGACA GCGCTGCAGA AATGCGTCTG GCGGGAGGAT
GGCTGGCTCT ATCTGGAAAA TGGCGGTCCG GTGCCGGAGC TAACCGTGCC GGCGCCCGGA
GCCACTGGAA CCGTCGCTGA GCGCGTCGTG AACGAAACTG ACTTCGACGA GCTGGCGCTT
CCACCGGAGT TTCAGTGGCT GCGTACCCCT GTTCCCTCGC GCATTTTCTC GTTGACCGCC
CGGACCGGTC ATCTCCGGCT CTTCGGCCGC GAGAGCATCG GCAGCTGGTT CGAGCAGGCG
CTCGTCGCCC GGCGGCAGGA GCATCATTCT TTCCGCGCCG AAACAGTCAT CGACTTTGCG
CCCGATACAT ACCAGCAGGT GGCGGGGCTC ACGCATTACT ATAACCGGCA AAAGTTTCAT
GCTCTCGGCA TCACACATCA CGAGACGCTT GGGCGCGTTA TCACCATACT CTCCTGTCCG
GGGGATTTCC CGAACGGACG GTTGGCGTAC CCGATCGGGA GCGGTGTCGC CTTAGCGGAT
GGCCCCGTTC AGCTTGCCAT GGAGGTGAGG GACAACGATC TCCGGTTCTT CTGGCGGGGA
ACGGCTCAGG CCGAGTGGGC GGCCATCGGT CCTGTGCTCG ACGCCGGCGT CATTTCGGAC
GAAGGCGGCC GCGGCGAGCA TGGTTCCTTT ACCGGTGCGT TTACGGGAAT GTTCGCTTTC
GACATCTCGG GCAGAGCGAT CCCTGCGGAC TTCGACCGCT TCCGGTATCA GGCGCTCACC
GTATGA
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| Protein sequence | MTATIRNPVL PGFNPDPSIC RVGDDYYIAT STFEWYPGVQ IHHSRDLVNW RLVRRPLERA
SQLDMRGNPD SCGVWAPCLS YCDGLFWLVY TDVKRLDGNF KDAHNYIVTA EAVEATWSDP
VYVNSSGFDP SLFHDDDGRK WFLNMQWNHR TESFGGSPKS PAFDGILLQE WDERTRKLVG
PVKNIFAGSP LGLVEGPHLF KRDGWYYLTV AEGGTGYDHA VGMARSRTID GPYEMHPNVH
LITSKDHPEV ALQRAGHGQY VETPDGQAYH THLCGRPLPP LRRCTLGRET ALQKCVWRED
GWLYLENGGP VPELTVPAPG ATGTVAERVV NETDFDELAL PPEFQWLRTP VPSRIFSLTA
RTGHLRLFGR ESIGSWFEQA LVARRQEHHS FRAETVIDFA PDTYQQVAGL THYYNRQKFH
ALGITHHETL GRVITILSCP GDFPNGRLAY PIGSGVALAD GPVQLAMEVR DNDLRFFWRG
TAQAEWAAIG PVLDAGVISD EGGRGEHGSF TGAFTGMFAF DISGRAIPAD FDRFRYQALT
V
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