| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1707 |
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| Symbol | |
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| ID | 5322565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1785786 |
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| End bp | 1786553 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790645 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001327377 |
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| Protein GI | 150396910 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGG CTGGCAAAGT CGTACTCGTA ACGGGGGCGG CGCGTGGGAT CGGGGCGGCC
ATTTCTGTCC GGCTCTGGCA GGAGGGCATG TTTGTCTATG CCGCCGATAT TGATGAGGAA
GCGCTGGCCG GTGCGGCGCC GGCAGGCGCG GATGAACGTT GGATTCCGGC CGGGGTGGAC
ATTACCGATC GGGGTTCGAT CGACAGGCTC ATTGCCGCAA TCGGCCTGCG GTTCGGCGTC
CTCCATGGAC TGGTCAACAA CGCTGCGATG CTTGACGCAA GTCTCTTAGC CGAACTGGAC
TATGACCGCT ACCGCCGCGT AGTGGCGACG AACCTCGACG GAGCGTTGCT TTGCGTATTG
AGCGCGCTTG AACTGATCAA AGCTTCCGCA CCTTCGGCCA TCGTAAATAT CGCCTCTATC
ATGGGTATGG CCGGGTTGCG CGACGCAATT CCTTATTCGA CGGCCAAGGC CGGTCTCATC
AATATGACGC GCAATCTGGC GGTGGAATTG GCGCCCCAGT CCATCCGGGT GAACGCGGTC
GCCCCCGGTT TCATCGACAC GCGAATGGCG CGGCTTGCCG ATGGCAGCAG CGAATATGCT
ACCGAAGAAT TCAGGGAAGT CTATTTGAAG CACCGGCGGC TCCCGCTGGG TCATCCCGGA
ACCGCCGAGG ATATCGCCGG ACCCGTCGCG TTCCTCCTTT CCTCCGACGC CCGCTACATC
ACCGGCCATA CGCTGGTGGT GGATGGTGGG GTTACTGCAA CCTATTGA
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| Protein sequence | MNLAGKVVLV TGAARGIGAA ISVRLWQEGM FVYAADIDEE ALAGAAPAGA DERWIPAGVD
ITDRGSIDRL IAAIGLRFGV LHGLVNNAAM LDASLLAELD YDRYRRVVAT NLDGALLCVL
SALELIKASA PSAIVNIASI MGMAGLRDAI PYSTAKAGLI NMTRNLAVEL APQSIRVNAV
APGFIDTRMA RLADGSSEYA TEEFREVYLK HRRLPLGHPG TAEDIAGPVA FLLSSDARYI
TGHTLVVDGG VTATY
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