| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1603 |
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| Symbol | cobT |
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| ID | 5322461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1699083 |
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| End bp | 1700099 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640790547 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001327279 |
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| Protein GI | 150396812 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.322725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.317786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA GCGGCCTGCC GTTTGATGAT TTTCGCGCGT TACTGCGCAA CCTGCCTGGC
CCCGATACGG CGGCACTCGT TGCCGCACGC GAGCGGGACG GGCAATTGAC GAAGCCGCCC
GGCGCACTGG GGCGCCTGGA GGAAATCGCA TTCTGGCTTG CCGCCTGGAC GGGCCGCCCG
CCGGCCGTCA ACAGGCCGCT CGTGGCGATT TTCGCCGGCA ACCACGGCGT GACCCGTCAG
GGAGTGACGC CGTTTCCGGC TTCGGTCACC GCGCAGATGG TCGAGAACTT CGCCGCCGGT
GGGGCTGCCA TCAACCAGAT CTGCGTAGCG CATGATCTCG GCCTCAAAGT CTTCGATCTG
GCCCTTGATT ACCCGACCGG CGATATCACC GAAGAACCCG CTCTGTCCGA GCGTGATTGC
GCCGCTACCA TGGCCTTCGG CATGGAGGCC ATCGCCGGCG GCACGGACCT GCTTTGCATC
GGCGAGATGG GAATTGGCAA TACAACGATC GCAGCAGCCA TCAATCTCGG CCTTTACGGC
GGCACTGCCG AGGAATGGGT GGGGCCGGGA ACCGGCTCGG AAGGAGAGGT TCTCAAGCGC
AAGATTGCGG CGGTGAAAAA GGCCGTGGCA CTGCACCGCG ACCACTTGTC CGATCCGCTG
GAAGTCATGC GCCGGCTTGG CGGCCGCGAA ATCGCGGCCA TGGCGGGCGC CATTCTCGCG
GCGCGCATGC AAAAGGTACC CGTCATCATC GACGGTTATG TCGCAACCGC AGCCGCGGCG
ATCCTCAAGG CCGCCAATCC GGCCGCGCTC GACCATTGCC TCATCGGGCA CGTTTCAAGT
GAGCCCGGCC ACATGCGCGC GATCGAGAAG CTCGGCAAGA CCCCGCTCCT GGCCCTCGGG
ATGCGGCTTG GCGAAGGCAC AGGTGCGGCC CTTGCAGCGG GTATCGTCAA AGCGGCGGCG
GCGTGCCACA GCGGCATGGC GACCTTTGCG CAGGCTGGCG TCAGTAACAA GGTGTAG
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| Protein sequence | MSASGLPFDD FRALLRNLPG PDTAALVAAR ERDGQLTKPP GALGRLEEIA FWLAAWTGRP
PAVNRPLVAI FAGNHGVTRQ GVTPFPASVT AQMVENFAAG GAAINQICVA HDLGLKVFDL
ALDYPTGDIT EEPALSERDC AATMAFGMEA IAGGTDLLCI GEMGIGNTTI AAAINLGLYG
GTAEEWVGPG TGSEGEVLKR KIAAVKKAVA LHRDHLSDPL EVMRRLGGRE IAAMAGAILA
ARMQKVPVII DGYVATAAAA ILKAANPAAL DHCLIGHVSS EPGHMRAIEK LGKTPLLALG
MRLGEGTGAA LAAGIVKAAA ACHSGMATFA QAGVSNKV
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