| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1559 |
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| Symbol | |
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| ID | 5322417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1653276 |
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| End bp | 1654016 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790504 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_001327236 |
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| Protein GI | 150396769 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.509292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATC AACAAGCTGT CCTCAATTTG CTGGATATTG TGGAGTATGG AGGTTGCGCA
GACCCCGAGC GCTTCTTCGC CCTGATGCGA CGAACCTTCA ACATCGCGCA CCTCTTATAC
CTGGAAGCGG AGTCTCTTCC GGATGGTCTG AGAATCTGCC GTCTGCATCA CACGTTTGGC
GCCTATGCCG CCGAAGTCTA CGCCGTACGA GGCCTCCACA GGATCGATCC GATCCTCAAG
CTTGCGCTTG GCGGTGTCAG ACCGGTCGAA TGGGCGACGG CACGGCGACG CTTTCCGGAG
TGCGAGCCAC TTTTCGTGGC GGCCGAGGAA ATAGGACTTT CCACTGAGGG TGTCGCCTTG
CCGCTGCCTT CGCCCGCCGG CCGCATGGCC CTCCTCGCGA TCAGCGCCAA CATGTCGCCG
GTCGAGTGGT CCGCCTACCG CCGTTGCCAT CTGCGGGATT TCCAACTGGC TGCGAACCTG
TTCCATGCAT CTATGCTCGA ACATTCGGCA ATGGCTGGGG CGATGGAAGA CGAGCGCGAT
CTCCGCCTGA CCGGGCGGGA GACCGAGGTC CTGACCTGGT CGGCGGCTGG CAAGAGCTAT
TGGGAGATTG CGACTATACT CGGCATATCC GAGCGAACCG TGCGCTTCTT CATGACCAAT
GCCCGCCGCA AACTGAATGT GGTGTCCAAT ACTCAAGCTG TAGCCCATGC TGTTCGACAC
GCGCTGATTC CCACCGTCTG A
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| Protein sequence | MTNQQAVLNL LDIVEYGGCA DPERFFALMR RTFNIAHLLY LEAESLPDGL RICRLHHTFG
AYAAEVYAVR GLHRIDPILK LALGGVRPVE WATARRRFPE CEPLFVAAEE IGLSTEGVAL
PLPSPAGRMA LLAISANMSP VEWSAYRRCH LRDFQLAANL FHASMLEHSA MAGAMEDERD
LRLTGRETEV LTWSAAGKSY WEIATILGIS ERTVRFFMTN ARRKLNVVSN TQAVAHAVRH
ALIPTV
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