| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1542 |
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| Symbol | |
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| ID | 5322400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1633870 |
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| End bp | 1635735 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790487 |
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| Product | ABC transporter related |
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| Protein accession | YP_001327219 |
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| Protein GI | 150396752 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.264596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.178862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCG CCATAGTCAA GATTTTCGAG AACTGGATTG ATCCTTTCGG ACCGCGCGAG
CGGCTGCGGC CGCCGGGATC ACTCTGGGGA TTCGCCTGGT TTTATGCCGG CCAGGCGAAA
GGACCGTTTC TCGCCATGGC GGTTCTCGGC GGACTAGTGG CGATGCTGGA AGCCGGTCTT
TTCTATTTCG TCGGCCGGCT TGTCGACGTG CTCGACATGG TCCGGCCTGA GGACGGCTGG
AACGGGTTGA TCGCGGCCCA CGGGCCTGAA CTGCTCTTCA TGCTGCTGAC GGTGCTGGTG
TTCCGCTTCC TTGCGGTGAC GCTTGCGGCG CTCTTGGAGG AGCAGTCGAT CATCACCGGT
TTCCTGAACC TCGTCCGCTG GCAGTCCTAT GTTCATGTAG CTCGGCAATC GTTGTCCTTC
TTTCAGAACG ATTTTTCCGG GCGCATCGTA ACAAAAGTCT GGTCCGGCGC GCAGGCAACG
AGCGATTTGA TCGTTTCGCT GCTGCAGGTG GTCTGGTTCA TCGTCATCTA TACGGCCTCG
ACCATGGCGC TCATCGCTCA GCTCGATTGG CGCCTGGCGG CGATGGTTGC CTTCTGGGTC
GCCATCTTCC TGGTGCTTGC CCGCCATTTT GTGCCGCGTG TGCGCAAACA CGCCCGCGAA
ACTGCAGAGA TGGCGTCGAT GCTGAACGGC CGCATGGTCG ACGCCTATGC GAACATCCAG
ACGCTGAAGC TCTTCGGCAG TGACGAGGAA AACGATCGCT ATATCAGGGC AGGGTTCCAC
CGCTTTCAGG GAGCAGTTAT CCCTTTCACC CGCCTGCTGA CGGCGGTGCG GGCCTCGCTC
GCACTTTTGT CGGGCCTGAT GATCACGGCC ATCGCAATCT ACTCGGTCCA CCTGTGGCTG
GAAGGTGCGG TCAGCTCCGG TGCCGTCGCC TTCACCCTGG CGCTGGTGCT TCGACTCAAC
ATGTTGCTCG GGCGGATGAT GTCGCAGTTC AATGCGATCA TGCGCAATAT AGGCACGATA
CAGAATTCGG CCGAGCTGGT GTCGCAGCCG ATCGGGCTGA CCGACCGGCC CGGTGCGCCG
GAACTGAAGG TCAGCCGCCC GGAGATACGT TTCGAACACG TGACGTTCCA TTATGGCAGG
GGGGGCGGGG TCATCGACGA CTTCTCGCTG ACCATTCGTC CGGGCGAGAA AGTCGGCATC
GTCGGCCGTT CCGGTGCCGG CAAGTCGACC CTGGTCAACC TGCTGCTGCG GTTTTACGAT
CTCGAAGGCG GACGCATTCT GATCGACGGG CAGGACATTG CCGCTGTCCG GCAGGAATCG
CTGCGCAACC AGATCGGCAT GGTAAGCCAG GACACTTCGC TTCTGCACCG GTCGATCCGC
GACAACATCC TCTTCGGGCG AACGGGAGCG AGCGACGAGC AACTGATCGA AGCGGCGCGC
AAGGCGGAAG CTTACGACTT CATCGTGGAT CTGCAGGATC AGCGTGGCCG CAAAGGTTTC
GAAGCCCATG TGGGCGAGCG TGGCGTCAAG CTTTCCGGCG GCCAGCGCCA ACGCGTCGCG
ATCGCCCGCG TCATGCTCAA GGATGCGCCC ATCCTCGTCC TGGACGAGGC GACTTCGGCC
CTCGATTCGG AAGTGGAGGC TGCGATCCAG TCCAATCTGG AGCGACTGAT GCAGGGAAAG
ACGGTTCTGG CGATTGCACA CCGGCTATCC ACGATTGCTG CCCTCGACCG GCTCGTCGTC
GTGGACAGGG GGCGCATCGT CGAGAACGGC ACCCACGCCG AACTGATCGC CAATGGTGGT
CTCTACGCGG ATCTCTGGTC GCGCCAGTCC GGCGGTTTCC TCGCTCAGGA AGAGGCCGCG
GAATAG
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| Protein sequence | MLRAIVKIFE NWIDPFGPRE RLRPPGSLWG FAWFYAGQAK GPFLAMAVLG GLVAMLEAGL
FYFVGRLVDV LDMVRPEDGW NGLIAAHGPE LLFMLLTVLV FRFLAVTLAA LLEEQSIITG
FLNLVRWQSY VHVARQSLSF FQNDFSGRIV TKVWSGAQAT SDLIVSLLQV VWFIVIYTAS
TMALIAQLDW RLAAMVAFWV AIFLVLARHF VPRVRKHARE TAEMASMLNG RMVDAYANIQ
TLKLFGSDEE NDRYIRAGFH RFQGAVIPFT RLLTAVRASL ALLSGLMITA IAIYSVHLWL
EGAVSSGAVA FTLALVLRLN MLLGRMMSQF NAIMRNIGTI QNSAELVSQP IGLTDRPGAP
ELKVSRPEIR FEHVTFHYGR GGGVIDDFSL TIRPGEKVGI VGRSGAGKST LVNLLLRFYD
LEGGRILIDG QDIAAVRQES LRNQIGMVSQ DTSLLHRSIR DNILFGRTGA SDEQLIEAAR
KAEAYDFIVD LQDQRGRKGF EAHVGERGVK LSGGQRQRVA IARVMLKDAP ILVLDEATSA
LDSEVEAAIQ SNLERLMQGK TVLAIAHRLS TIAALDRLVV VDRGRIVENG THAELIANGG
LYADLWSRQS GGFLAQEEAA E
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