Gene Smed_1474 details

Gene Information

• Locus tag: Smed_1474
• ID: 5322332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sinorhizobium medicae WSM419
• Kingdom: Bacteria
• Replicon accession: NC_009636
• Strand: -
• Start bp: 1558074
• End bp: 1561460
• Gene Length: 3387 bp
• Protein Length: 1128 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640790422
• Product: hypothetical protein
• Protein accession: YP_001327154
• Protein GI: 150396687

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.105081
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0154551
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTGACA TCCGCGGCGA AAGAGTGGAC TTTCGCAGGG AAGACATCGT CGCGCTGCAC 
GCTTTGCCCT CGGCTCAAGC TCACGACCCG GTCATCGTGC ACACGCCGCG GCCTGGCGGT 
GCCTGGCGCC TGTGCGGAAG GATTCTGCTC TGCTGCTCGC TGCTCGTCTT CATCGCCGTT 
GCTTCGCTTA TCGCCATAAT AGAAAGCGGA ATTGTAGACG GGCCGCTGAA TGCCAGGGCC 
AGGACGGCGC TCAACACCGC ACTCGGACAG GATTATAGCG CCGATGTCGA GAGCACGGTG 
ATCCGGCTGA CCGGCGGCGG CGCACTTGCG CTCAAGGCGC GGGGCGTGAC GCTGAAGGAG 
CGCGGATCCG GCCGGCATCT CGCCAAGCTC GGTGCAATTT CGATCGCCCT CGATCCATTT 
GCCCTGGCGA CCGGCCGCAT CAATGTCTCG AGGCTTGAAG CGGAGGGTGG CGAGCTCGAC 
ACCGGGCTCC TGCCGCGCGG CGAGCCCATC GATCTTACAG CCATCCGCAT AGCGGACGTA 
GGCACTGCCC TCGAAGAATT GTTCGCACAG GGCGATCGGA TGTCGCGCTT GACCGCCGGA 
CGGTCGACCC AGACCGTCGT CCTCTCTGAC TTCAGCCTAA CGGTCAGCGG CACGCGTGGG 
CGGGCCGTTC CCGTCGAAAT CAAGACACTG CAATTCAGTC ACGACCCCGA CAGTTCGATG 
CGAGTTGAGG GCACGATTGC GGTTGACGGC ATCGAATCTC AGCTTACGGC AAAGGCTCTC 
GGCGACAGGG GGCGCATCGC CGCCTTCGAG GCCGGGCTCG ACGCGCTGCC GCTTTCGCCG 
TTCCTCCATC ACGGCAAGTC GGGCAATGAG GAGGCCTTCG GCATCGAAGC CACCGCCAAT 
GTGACGCTCA AAGCCGCCCG CGCTGCGGAT GGCACGAAGC CGGCACTCAC GGCGGCCGTG 
AAGACGTCCA GGGGCTCCTT CCACGCCGGC GGCCTCGCCT CCAAACTCAA CTCCGCGGAA 
CTGAACGTCT CCTACGATTT CGAGCGAGCC TCGGTCGAGA TATTGTCGTC GATGGTCAGG 
ATCGGCCGGT CGAGCTTCCC CTTCACGGGA GCCCTGATCG ATCTCGACAA GATTGCCGGC 
GCAGACCGGA AAGGATTCGC GGTCGATCTC CTGTTCAAGA ACGCCAGCTC CGACCCTGAG 
GACATGCAGG CGCCCCCGCT TGCCTTCGAT GCCAAGGCAA GCGGGCGTTT CGAGTCCGAC 
ACCCACCGGC TGATCTTCGA TCAACTCGCG ATATCGAGTC CGCTTGGCTC CATGGCGGGT 
TCGCTTTCGG TCGCCTTCGG CAAGACGTCG CCGCGCATCA GTTTCGCTGC GGTCAGCGAC 
AGGATGCACT CCAGCGCCGT CAAGCAGCTG TGGCCCTGGT GGCTGGCGAA GGGGGCTCGT 
CGCTGGGCGT TAGGAAACCT CTTCGGAGGC ATGGTAAGCG ACGCACGCAT CGAGGTCTCG 
ATTCCGGAGG GGCGTATTGC CAGTAGCGGC GGAGAATTGA GGCTCAACGA AAAGGAGCTC 
AACATCAACT TTGCCGTCGA CGAGACGCGC ATCAACATCG CGGGAGAGAT ACCGCCGTTG 
CGTGACACGG CCGGACGCTT CAGCCTGAGC GGCGAGCGGA TGTCCGTCGC CGTCGAGAAG 
GGCGCCGCCT TCTTCCCGTC CGGTCGCTCC GTCGCCTTGA ATGGCGGGGA TTTCATCATT 
GCCGACGTCT ATAAAAAGCC GCTGATGGCG GAAATGAAGA TCAAGGTCGC GGGCGAGGCG 
GACGCGATAG CCGAGCTCGT CCGCTACAAA CCGATAGAGG CGCTTCGGAA GACGCCTTTC 
ACTCCCGAGG ATTTTACCGG CCCGATGACG GCGCTGGTGG GTGCGCGGTT TGGTCTCATT 
TCCGACCAGA AGCCGCCACG TCCACTGTGG CAGGTGGAAA TGGAGCTTGA GGACGTGACG 
ATAAAGCGGC CCGTTGCAGG ACGTTCGATC GCCGATCTCG ACGGGACGAT GAGGATCGAC 
AACGAGCGTG CAGTGCTCCA GGCGAACGCC CTAATCGACG GTGCGAAGAT GCGCGTCGCG 
CTCACCGAGC CGGTTGGCAC CTCGGCCAAT GTGGCGAGAA CGCGCGAAAT CTCCGGAACG 
CTCGACGACG CGGCGCGGGC GAAAATCGCT CCGGCCCTGT CCGGAATCGT CAGCGGGCCC 
GTGGGCATAG ACGTTTCGCT TGCGGAAGAC GGCAGCCAGT CGGTCAAGGT TGACCTCGGA 
AAGGCCGTGC TGTCGCTTCC CTGGATTGGC TGGAGCAAGG GCTCGGGCAT CCCAGCAAAG 
GCGCAATTCA CAATTCGGGC GGCCGGTGGC ATCACGGAGA TAAACGACCT GCGGCTCACC 
GGAGAAGGTT TTGGCGGCAA TGGCGAATTG CGCGTAGACG AATCCGGCCT TGCAGCGGCG 
CGGCTGAGCG GCGTGCGCCT GGCAAGCGGC GACGATTTTT CCGTCACAGT GGGACGCAGC 
AAGGGAGGCT ATTCGGTAAA CCTAACCGGC ACCGCAGCGG ATATCCGACC GGCGCTCGCT 
CGCGTCAAGG GCGGCGCGAG TTCAAAGGAT GGCGGCAATG TGAAGATCAA GGCGCGGCTC 
GACCGGGTCA CCGGTTTCAA CGGCGAAGTC CTGTCGAATG TTGATCTCAC CTATTCGAGC 
CGCGGCCAGC AGATCGACGA TGTCAACCTT TCAGCGATAA CGGCAAGCGG CCAGGCAGTC 
GTTGCCAGGT TGGTCAAGGC CGGTGCGGAC AACACGCTGG AACTGACGAC AAGCGATGCC 
GGAGCCTTTG CACGCTTCAT CGACATCTAC CGCAATATGC GGGGCGGACT CCTCAATTTG 
CGCCTGCGTG ATCGCGGTGC CAACTCGTGG CGCGGAACCG TGGACATCCG CAAGTTCTCG 
CTGGTCGGCG AACAAAGGCT GCAATCGATG GTCTCGACCC GGGCGGGCCA GGACGGTCGC 
AGTCTCAACG AAGCGGTTCG ACGCGATATC GACGTGAGCA CGGCTCAGTT CGAGCGTGGC 
TTCGCGCAAC TCCTGCTGGA TCAGGGCGCA ATTCGGGTCG GCAGCGGAGT GGTCCGCGGT 
ATCGATGTGG GCGCGACCTT CCAGGGAACT GTCCGCGACG CCAATGGTCG TATGGACATG 
ACGGGTACGT TCATGCCGGC TTACGGATTA AACCGGCTCT TCGGGGAATT GCCGCTGATC 
GGTGTCCTGC TCGGAAATGG GCGCGACCGG GGCCTGTTGG GGATCACGTT CAAACTCGCC 
GGACCGTTCA GCCAGCCAAG TCTGACGATC AACCCGCTGT CGATCATAGC GCCGGGCGTC 
TTCCGCAATA TCTTCGAGTT TCAATGA 

 

Protein sequence

MSDIRGERVD FRREDIVALH ALPSAQAHDP VIVHTPRPGG AWRLCGRILL CCSLLVFIAV 
ASLIAIIESG IVDGPLNARA RTALNTALGQ DYSADVESTV IRLTGGGALA LKARGVTLKE 
RGSGRHLAKL GAISIALDPF ALATGRINVS RLEAEGGELD TGLLPRGEPI DLTAIRIADV 
GTALEELFAQ GDRMSRLTAG RSTQTVVLSD FSLTVSGTRG RAVPVEIKTL QFSHDPDSSM 
RVEGTIAVDG IESQLTAKAL GDRGRIAAFE AGLDALPLSP FLHHGKSGNE EAFGIEATAN 
VTLKAARAAD GTKPALTAAV KTSRGSFHAG GLASKLNSAE LNVSYDFERA SVEILSSMVR 
IGRSSFPFTG ALIDLDKIAG ADRKGFAVDL LFKNASSDPE DMQAPPLAFD AKASGRFESD 
THRLIFDQLA ISSPLGSMAG SLSVAFGKTS PRISFAAVSD RMHSSAVKQL WPWWLAKGAR 
RWALGNLFGG MVSDARIEVS IPEGRIASSG GELRLNEKEL NINFAVDETR INIAGEIPPL 
RDTAGRFSLS GERMSVAVEK GAAFFPSGRS VALNGGDFII ADVYKKPLMA EMKIKVAGEA 
DAIAELVRYK PIEALRKTPF TPEDFTGPMT ALVGARFGLI SDQKPPRPLW QVEMELEDVT 
IKRPVAGRSI ADLDGTMRID NERAVLQANA LIDGAKMRVA LTEPVGTSAN VARTREISGT 
LDDAARAKIA PALSGIVSGP VGIDVSLAED GSQSVKVDLG KAVLSLPWIG WSKGSGIPAK 
AQFTIRAAGG ITEINDLRLT GEGFGGNGEL RVDESGLAAA RLSGVRLASG DDFSVTVGRS 
KGGYSVNLTG TAADIRPALA RVKGGASSKD GGNVKIKARL DRVTGFNGEV LSNVDLTYSS 
RGQQIDDVNL SAITASGQAV VARLVKAGAD NTLELTTSDA GAFARFIDIY RNMRGGLLNL 
RLRDRGANSW RGTVDIRKFS LVGEQRLQSM VSTRAGQDGR SLNEAVRRDI DVSTAQFERG 
FAQLLLDQGA IRVGSGVVRG IDVGATFQGT VRDANGRMDM TGTFMPAYGL NRLFGELPLI 
GVLLGNGRDR GLLGITFKLA GPFSQPSLTI NPLSIIAPGV FRNIFEFQ