Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1466 |
Symbol | |
ID | 5322324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1548239 |
End bp | 1549516 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790414 |
Product | FeS assembly protein SufD |
Protein accession | YP_001327146 |
Protein GI | 150396679 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.269271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0505489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGC AACAGGCCAT TAAAATGACG GCGGCGGAAA CGGCGCTCGT CGATGCCTAT ACGGCGCAGA TCGGTGATTT GCCGGGTGAC GGCGCCGTGC TCTCGCTGCG CGACACGCTG GTTCACGAGT TGAAAACTTC CGGCCTGCCG ACCCGTCGCG TCGAGGCATG GCATTATACG GACCTGCGCA CGCTGCTGCG GGCTGTACCA GCGGCGGATC CGACTGCCTT TGCCGAACGC GTCGATCCGC TCGTTCCGGG TTCGTCGGTT CTCTCGGTGC GCAACGGACA GGCCGACATC AAGAACGTTC CGGAACAGCT GACCGTGCGC TCATACACCG AGAGCCTGCT CGATGGTTCG GCAGCAGCCG GCCTCTCCGT GCTCGGCGCG GATGATGCGA TCGGACGGAT CAATGGCGGG CTCGTGCGCG GCGGACTGGA AATCGCGGTC GCAGCCGGTG TTGAGATCGA GGCTCCGGTC GAAATCCAGG TGGTCCAGAG CCATGGACAG GCGCATACGC GCTTTCCGGT TTCTTTCGGA GCCGGTGCCA AAGCGACCGT AATCGAGCGG CATCTTTCGA CGAACGCGGA GCAGAGCTTC GTATCCTCGG TCAGCGACGT GACGCTTGCT GAAGGTGCGG ACGTGATCTG GATCATCCTG CAGCAGCAGG GACCTGCGGA TACGCATCTC GGCCAGATTC GCTTCGATCT CGGCAAGGAC GCGAAGCTGC ACCTCTTCGT CATCAATGCC GGCGGAAAGC TGGTCCGTCA GGAGCTCCAT GGCCGGGCGA CTGGAGAAGG CGCTGACCTC ACGCTACGTG GGATCAACCT TCTCGGCGGT GAAAGCCACA CGGATCTGAC GTTCACGTTG AGCCATGATG TGCCGCACAC GACATCGAGC GAGATCATCC GCAACGTCGT CTTCGACCGG GCGAAGGGCG TGTTTCAGGG CAAGATCCTG GTCGCGCAGG ATGCGCAGAA AACCGACGCG AAAATGTCGT GCAACACGCT GCTCCTGTCA GACGATGCGG ACTTCTCGGC AAAGCCTGAG CTGGAGATCT TCGCTGATGA CGTTCAGTGC GGTCACGGTG CGACGGTCAT CGATATCGAT CATACGCAAC TCTTCTACTT GCTCGCACGC GGCATACCGG AGAACAAGGC GCGTGCGATG CTCGTCAACG CCTTCGTCGC CGAGATCGTC GAGGAGCTGG AAGACGACGA AGACCTGGTT GAGTCGCTCG AGAGCGTGAT TTCGGCCTGG CTCGAAAAAC ACGCCTGA
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Protein sequence | MNMQQAIKMT AAETALVDAY TAQIGDLPGD GAVLSLRDTL VHELKTSGLP TRRVEAWHYT DLRTLLRAVP AADPTAFAER VDPLVPGSSV LSVRNGQADI KNVPEQLTVR SYTESLLDGS AAAGLSVLGA DDAIGRINGG LVRGGLEIAV AAGVEIEAPV EIQVVQSHGQ AHTRFPVSFG AGAKATVIER HLSTNAEQSF VSSVSDVTLA EGADVIWIIL QQQGPADTHL GQIRFDLGKD AKLHLFVINA GGKLVRQELH GRATGEGADL TLRGINLLGG ESHTDLTFTL SHDVPHTTSS EIIRNVVFDR AKGVFQGKIL VAQDAQKTDA KMSCNTLLLS DDADFSAKPE LEIFADDVQC GHGATVIDID HTQLFYLLAR GIPENKARAM LVNAFVAEIV EELEDDEDLV ESLESVISAW LEKHA
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