Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1453 |
Symbol | |
ID | 5322311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1534608 |
End bp | 1535930 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790401 |
Product | homoserine dehydrogenase |
Protein accession | YP_001327133 |
Protein GI | 150396666 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0771081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000482851 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGATG CCCTCAAAAT CGGCATTGCG GGCTTGGGGA CAGTCGGTGC CTCGCTCGTG CGGATCCTCC AGGATCGTCA TGAGACACTG GCGACTACAT GTGGAAGGGC GATCGAGATT ACGGCCGTAA CGGCAAGGGA CAGATCAAAG GATCGGGGCG TGGATCTTGC CGGCATCACC TGGTTCGACG ACGCGGTTTC TCTGGCGTCG CAAGGAGGCA TAGACGTCTT TGTCGAACTG ATGGGCGGCA CCGGAGATCC GGCCTATGCC TCGGTCAAGG CGGCGCTCAC GCACGGCGTC CATGTGGTGA CCGCCAACAA GGCACTTCTG GCGGCACACG GAATCGAGCT GGCGGAAATC GCCGAGAAGC ATGGTGCGCT TCTGAACTAT GAAGCGGCTG TCGCCGGTGG CATTCCCGTC ATCAAGGCGC TTCGCGAATC GATGACCGGG AACACGATTT CGCGCGTCTA CGGGATCATG AACGGCACAT GCAATTACAT CCTGACGAAG ATGGAGAAAG AGGGTCTCTC CTTCGAGGCC TGCCTCAAGG AAGCTCAGCG TCTGGGCTAT GCCGAAGCCG ATCCGGCCTT CGACATCGAA GGCAACGACA CCGCGCATAA ACTCTCTATC CTGACGAGCC TTGCCTTCGG TACCGCAATC GCTGCCGACG ATATCTACCT TGAGGGCATT ACCAACATCT CGATCGAGGA CATCCAGGCG GCCGCCGATC TCGGTTACCG CATCAAGCTT CTCGGGGTCG CCCAGCGTAC CGAAAGCGGT ATCGAGCAGC GCGTACACCC GACCATGGTC CCACATGACA CCGTCATCGC GCAGGTCGAT GGGGTGACAA ATGCCGTGGC GATCGAATCC GATATTCTCG GCGAACTCCT GATGGTCGGC CCCGGCGCCG GAGGGGATGC CACCGCATCG GCAGTGCTTG GCGATATCGC GGATATCGCG AAAAGCCGCC CCGGCGCGCA GCACGTTCCG GCATTCGGCC GCCCTGCGAA CGCGCTTCTT CCCTATAAGC GCGCCCGAAT GCAGAGCCAC GAGGGCGGAT ACTTCATCCG GCTCAAAGTG GTCGACCGCA CCGGAGTCTT CGCCAATGTC GCGAAGCAGA TGGCGGACAA CGACATTTCG CTCGAATCTA TCATGCAGCA TTCCAAGCAC TATGCCGATC CTGCCGAGCC GAAGACGATC ATCCTCGTTA CGCATGCGAC CTTTGAGGCT TCCGTGCGCA AAGCGATCGT CTCGATCAAG GCCGAGGGAT ACCTTGTCGG GGAACCGCAG GTGATTCGGA TCGAGCGTCC GAAGGCTTGG TAG
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Protein sequence | MADALKIGIA GLGTVGASLV RILQDRHETL ATTCGRAIEI TAVTARDRSK DRGVDLAGIT WFDDAVSLAS QGGIDVFVEL MGGTGDPAYA SVKAALTHGV HVVTANKALL AAHGIELAEI AEKHGALLNY EAAVAGGIPV IKALRESMTG NTISRVYGIM NGTCNYILTK MEKEGLSFEA CLKEAQRLGY AEADPAFDIE GNDTAHKLSI LTSLAFGTAI AADDIYLEGI TNISIEDIQA AADLGYRIKL LGVAQRTESG IEQRVHPTMV PHDTVIAQVD GVTNAVAIES DILGELLMVG PGAGGDATAS AVLGDIADIA KSRPGAQHVP AFGRPANALL PYKRARMQSH EGGYFIRLKV VDRTGVFANV AKQMADNDIS LESIMQHSKH YADPAEPKTI ILVTHATFEA SVRKAIVSIK AEGYLVGEPQ VIRIERPKAW
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