Gene Smed_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1389 
Symbol 
ID5322240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1464190 
End bp1465599 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content59% 
IMG OID640790331 
Productglutamine synthetase, type I 
Protein accessionYP_001327070 
Protein GI150396603 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.737079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG CGAGTGAAGT TCTGAAGCAG ATCAAGGAAA ACGACGTCAA GTTCGTGGAC 
CTGCGCTTTA CCGACCCCAA AGGCAAGCTG CAGCACGTGA CGATGGACGT CGTCTGCGTC
GACGAAGACA TGTTCGCCGA TGGCGTGATG TTCGATGGTT CCTCGATCGG CGGCTGGAAG
GCTATCAACG AGTCCGACAT GGTGCTGATG CCTGATCCGG AAACAGCCCA TATGGACCCG
TTCTTCGCGC AGTCCACCAT GGTCATCTTC TGCGATATCC TCGATCCGGT TTCGGGCGAA
GCCTATAACC GCGATCCGCG CGGCACGGCC AAGAAGGCAG AGGCCTATCT CAAGGCGTCG
GGTATCGGCG ACACGGTTTT CGTGGGCCCG GAAGCAGAGT TCTTCGTTTT CGACGACGTC
AAGTACAAGG CTGATCCGTA CAATACCGGC TTCAAGCTCG ACAGCTCCGA ACTGCCCTCC
AATGACGACA CGGACTACGA GACCGGCAAC CTCGGCCACC GCCCCCGCGT CAAGGGCGGC
TATTTCCCCG TTCCGCCGGT CGACAGCAGC CAGGACATGC GCTCGGAAAT GCTGACCGTG
CTCACCGAAA TGGGCGTCAC GGTGGAAAAG CACCACCACG AAGTGGCTGC GGCGCAGCAT
GAGCTCGGCA TAAAATTCGA TGCCCTCGTC CGCAACGCCG ACAAGATGCA GATCTACAAA
TATGTCGTAC ACCAGGTAGC CAACGCCTAT GGCAAGACTG CCACCTTCAT GCCCAAGCCG
ATCTTCGGCG ACAACGGCTC GGGCATGCAC GTTCATCTCT CGATTTGGAA GGATGGCAAG
CCGACCTTTG CCGGCGACGA GTATGCCGGC CTTTCTGAAA CCTGCCTCTA TTTCATCGGC
GGCATCATCA AGCATGCCAA GGCTCTGAAC GCCTTCACAA ATCCGTCGAC GAACTCCTAC
AAGCGTCTGG TCCCGGGCTA TGAGGCACCG GTTCTGCTGG CCTATTCGGC ACGCAATCGC
TCGGCCTCTT GCCGCATTCC ATTCGGCAGC AACCCGAAGT CGAAGCGTGT CGAAGTCCGT
TTTCCGGATC CGACGGCGAA CCCCTACCTC GCCTTTGCCG CCATGCTGAT GGCCGGCCTC
GACGGCATCA AGAACAAGCT CAACCCCGGC AAGGCTATGG ACAAGGACCT CTATGACCTG
CCCCCGAAGG AGCTGAAGAA GATTCCGACC GTGTGCGGCA GCCTGCGCGA AGCGCTTGAA
AGTCTCGACA AGGACCGCAA GTTCCTGACC GCCGGCGGCG TGTTCGACGA CGATCAGATC
GACTCCTTCA TCGAGCTGAA GATGCAGGAA GTCATGCGCT TCGAAATGAC GCCGCACCCC
GTCGAGTACG ACATGTATTA TTCCGTCTGA
 
Protein sequence
MTTASEVLKQ IKENDVKFVD LRFTDPKGKL QHVTMDVVCV DEDMFADGVM FDGSSIGGWK 
AINESDMVLM PDPETAHMDP FFAQSTMVIF CDILDPVSGE AYNRDPRGTA KKAEAYLKAS
GIGDTVFVGP EAEFFVFDDV KYKADPYNTG FKLDSSELPS NDDTDYETGN LGHRPRVKGG
YFPVPPVDSS QDMRSEMLTV LTEMGVTVEK HHHEVAAAQH ELGIKFDALV RNADKMQIYK
YVVHQVANAY GKTATFMPKP IFGDNGSGMH VHLSIWKDGK PTFAGDEYAG LSETCLYFIG
GIIKHAKALN AFTNPSTNSY KRLVPGYEAP VLLAYSARNR SASCRIPFGS NPKSKRVEVR
FPDPTANPYL AFAAMLMAGL DGIKNKLNPG KAMDKDLYDL PPKELKKIPT VCGSLREALE
SLDKDRKFLT AGGVFDDDQI DSFIELKMQE VMRFEMTPHP VEYDMYYSV