Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1358 |
Symbol | |
ID | 5322209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1439512 |
End bp | 1441575 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640790301 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001327041 |
Protein GI | 150396574 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.647754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGTT TGCTTAAGCT ACTGTCACTC GTGATTGGTG CAGTTTTCGC TGGAGGGCTT GGAGGCACGG CGGTCGCGCA GGAGCCACAG CATTTCAGTC CGAAGGGAAA GATGCCTTCG CAATACACGA TCGAGGCGCA GCAACAGCAG CGCCAGCTTC TGCCCTTCGC TGACAAGCGG GACTTTGAGG AAGCCAAGCG CGGCTTCATC GCTGCCCCGC CTTTCCGTCA GATCATGAAT GATAAAGGCG ATGTGGCCTG GAACATGGAC AACTGGGACT TCCTGCTTAA GGGGATGGAG TTCGACAGCA TCCACCCATC CCTGCAGCGT CAGGCTCTGC TCAACATGGA GTACGGCCTG TTCGAGGTTG TTCCGGGCAT CTATCAGATT CGCGGCTTCG ATCTCGCGAA CATATCCTTC ATCAAGGGCG ATACAGGTTG GATCGTGATC GATCCACTGA CGGTCAAGGA AACGGCACGT GCCGCGCTTA AATTCATCAA TGAGAAGCTT GGCGAGCGGC CCGTCGTCGC CGTCATCATT TCTCATTCCC ACGGCGACCA CTTCGGCGGT ATTCGCGGCG TCGTCGATGA TGCCGCGCTC GCCGCAGAAA AGGTTCAGAT TATTGCTCCC AAGGGTTTCT TGAATGAGGC GATCGCGGAA AACCTCTACG CCGGTAATGT GATGACCCGT CGCAAGTCCT ACACCTACGG CGACCTCGTG CCACCCAGCC CCTATGGACA TGTCGACGCT TCGATCGGCA AGGCGGTGGC CAGCGGCGAC GTGGGGATTC TACCGCCGAC CATCAGCATT GATCAGCCCA TTCAGGAACT CACCATCGAC GGCGTGAGGA TGGTCTTCCA GAACACGCCG GGCACCGAAG CGCCAGCGGA AATGAATACC TGGTTTCCGG ATTTCAAAGC ATTCTGGGCG GCCGAGAACA TCGTGGGCAG CCTCCACAAT ATTTTGACGC TGCGAGGGGC ACCTGTACGC GACGCTCTCG CATGGTCACA GTACATCAAC CTCGCGCTAT ACCAGTTTGG CAACCAAGCG GACGTGATGT TCGCCTCCCA TAGCTGGCCG CGTTGGGGCA AAGAGCGGAT CACCGAAGTG ATGCGCGGTC AACGCGACAT GTACGCGAAC TTGAACAACC AGGTCCTGCA CCTGGCGAAC AAAGGCGTCA CCATCAACCA GATCCATAAT GTTTACGAGC CGCCGAAGAG TCTGCAGCAA CAATGGCATT CACGGGGCTA CCACGGCTCC TATCTGCACA ACAGCCGAGC TGTCATTCAG CGATACCTCG GGTTCTGGGA TTTGAATCCA GCGACATTGG TGCCGCTATC GCCGGAGGAG TCTGCGCCTC TTTATGTGGA AATGATGGGC GGCGGATCCA AGGTGATGGC GAAAGGCCGT GATCTTTATG CTGAGGGCAA ATACCGCCTT GCAACCGAGA TTCTGAACAA GCTCGTCTAT GCTGAACCGG ACAACCAGGA GGCAAAAGAC TTGCTCGCCG ATACTTATGA GCAGATGGGC TACCAATTCG AAAGCCCCAG TCTCCGTCAC AGTTTCCTGG CTGGCGCGAA GGAGCTACGT GACGGCGTCG TCGCCGTAAA GGCTGCAAAG GCGGGCAGTC CTGACTTCGT GCGCGGCACG AGCACCGAAC TATTCCTCAA CTACCTTGGT ATCCAGATGG AAAGCGGTAA GGCGGAGGGC ATGACTTTCA AGATCAATCT TTCGACGCCA GATAACGGCG AGAAATTTGT CCTCGAAATG AGCAATGCCA CGCTGACAAC TATCGCCGGG TATCAGGCCG AAGACGCCGA CCTGACCGTC ACGATTGACC GCCGCGAACT GGAGGATGTC ATGATCGGCA CTGCGACACT TTCCGATAAA GTATCGTCCG GTAAAGCCAA AATGGAGGGC AATCCGCAGG TGCTCGCACA ACTTGGCTCG ACGATGGTCA TGTTTGACAA CTGGTTCGAG GTTCTGCCGG GCACGAAGAA GCGCGAGGCC CTGCCAAAGC CTGAACTGTT TCAGGACGAC GCCACCCGCT ACGAAGGCCC GTAG
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Protein sequence | MNGLLKLLSL VIGAVFAGGL GGTAVAQEPQ HFSPKGKMPS QYTIEAQQQQ RQLLPFADKR DFEEAKRGFI AAPPFRQIMN DKGDVAWNMD NWDFLLKGME FDSIHPSLQR QALLNMEYGL FEVVPGIYQI RGFDLANISF IKGDTGWIVI DPLTVKETAR AALKFINEKL GERPVVAVII SHSHGDHFGG IRGVVDDAAL AAEKVQIIAP KGFLNEAIAE NLYAGNVMTR RKSYTYGDLV PPSPYGHVDA SIGKAVASGD VGILPPTISI DQPIQELTID GVRMVFQNTP GTEAPAEMNT WFPDFKAFWA AENIVGSLHN ILTLRGAPVR DALAWSQYIN LALYQFGNQA DVMFASHSWP RWGKERITEV MRGQRDMYAN LNNQVLHLAN KGVTINQIHN VYEPPKSLQQ QWHSRGYHGS YLHNSRAVIQ RYLGFWDLNP ATLVPLSPEE SAPLYVEMMG GGSKVMAKGR DLYAEGKYRL ATEILNKLVY AEPDNQEAKD LLADTYEQMG YQFESPSLRH SFLAGAKELR DGVVAVKAAK AGSPDFVRGT STELFLNYLG IQMESGKAEG MTFKINLSTP DNGEKFVLEM SNATLTTIAG YQAEDADLTV TIDRRELEDV MIGTATLSDK VSSGKAKMEG NPQVLAQLGS TMVMFDNWFE VLPGTKKREA LPKPELFQDD ATRYEGP
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