Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1269 |
Symbol | |
ID | 5322116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1362916 |
End bp | 1363800 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640790210 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001326954 |
Protein GI | 150396487 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.618635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.87927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGC CTGGTCAAGA TCGCCCCGCT GTCGTCGTCA TCGGTGCGTC GCGCGGAATC GGCAAGGCCA TTGCCGACGT GGCCGCCAGG GATGGCGCGC CGGTCGTATT GGTGGCGCGT TCGGCCGAGA CGCTCGCCAC CGCCGCTGAC GATATCCGAA AGGCCGGAGG CGAGGCGTAT ACACTCTCGC TGGATCTGCT GGCTGAAAAT GCGGCCGGCG GTGTCGACGA CTTCCTGTCC GCAAACGGCC TGTTCTGCGA CGTGCTCGTC AACAGCGCCG GTTTTGGCCT GCGCGGAGGC GCGGCGGTCC TGCCGCTCGA AGAGCAGCTC GGTCTCGTCG ATCTCAACAT TCGCGCCCTG ACAGAGCTCA CCTTGCGCCT CCTCCCGGGA ATGGTCGCGC GCCGGCGCGG CGGCGTCATC AACCTCGGCT CGGTCGCAAG CTTTACGCCC GGCCCTTACA TGGCGCTCTA CTACGCCAGC AAGGGTTTCG TTCGCTCGTT TTCAGAAGCG CTGCACCAGG AACTGCGCCG CACCGGTGTG ACCGTCACAT GCGTGGCTCC CGGTCCGGTC GCAACGGAGT TTCTGTCGAC CTCCGGCGCC AATCGCGTCG CACTGTTCAA GATCTTGCCC AAGCTCGAGC CGGGCTATGT CGCTGAAAGG GCCTGGCGCG GTTTCAAAGC AGGCCGCCGT CTGGTGATAC CCGGCCTCTC GGCCAAGCTG ACGATTCTGT TGGCTACGCT GGTGCCCTCG GCAATCATGC TCCCCCTGAT CGGCCGGCTG CAGCGCAGGA GCAAGGATCC TTGCCCCTGC GGTTCGGGTA GGAGCTACAC GGCATGCTGC GGCGCTCGCG GCAGCTCTCG CGACATCTCA ACGCAAAGCG GATAG
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Protein sequence | MTAPGQDRPA VVVIGASRGI GKAIADVAAR DGAPVVLVAR SAETLATAAD DIRKAGGEAY TLSLDLLAEN AAGGVDDFLS ANGLFCDVLV NSAGFGLRGG AAVLPLEEQL GLVDLNIRAL TELTLRLLPG MVARRRGGVI NLGSVASFTP GPYMALYYAS KGFVRSFSEA LHQELRRTGV TVTCVAPGPV ATEFLSTSGA NRVALFKILP KLEPGYVAER AWRGFKAGRR LVIPGLSAKL TILLATLVPS AIMLPLIGRL QRRSKDPCPC GSGRSYTACC GARGSSRDIS TQSG
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