Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1253 |
Symbol | |
ID | 5322100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1343557 |
End bp | 1344612 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640790194 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001326938 |
Protein GI | 150396471 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.708089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.587919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGATA TCCGCGACGT CGAGGTGATC GCGCCGAACT TCAAGCGGCG CCTTTCCGGC GTTACCTCGT CAATCATCCA GCTGGTGCCT GTGCAGCGTG CCCTTGGGCA GAAGATCGCG GTTCTCGGGC CTGGACTTCC AAAGAGCTTG CCGTCGGTTC GCTTTCGCGA TCTGATCCGC CTCTGGAAGA GGCCGCCGGG ACGGCGGTGC CGAGTCTGGC ATGCGCGCCG CAATGTCGAG ATGCTGCCGG CCGTTCTCCT CCGCGACCTG CTGCGGATGA AGATCAGGAT CGTCTTTACC TCCGCTTCGC AGCGCCGGCA TACCGGATGG AGCAAGTTCC TTATCGGCCG CATGGACGCG GTTATCGCCA CCAGTGCCAG GACGGCCGCC TATCTCGAAG TGCCGAACAC CGTTATCCTG CATGGAATTG ATACGCAGCG CTTTCAACCG CCTTTCGACA AGGCGGAGGC GAAGCAGGCG CTCGGCCTCG ATCCTGCGAA GAAATTCGTC GGATGCTTCG GGCGCGTACG CCGCCAGAAA GGAACAGACC TGTTCGTCGA CAGCATGATC GCCCTCCTGC CCGGCCGTCC GGGCTGGGGT GCAATCGTTG CCGGCCGTGC CACCGGTCCC CACGCGGCCT TCGAAACCGA ACTGAAGGAA CGCGTCGCAA AGGCCGGACT CGCCGACCGA ATCCTCTTTG TCGGCGAGCA TACGAATATT CCCGATTGGT ACCGCGCTCT CGACCTCTTC ATCGCACCGC AGCGATGGGA AGGCTTCGGC CTCACGCCGC TGGAAGCCAT GGCGACCGGG GTGCCGGTGG TGGCAACCGA TGTCGGCGCC TTTTCGGAAC TCGTAACAGT CGGGAACGAA GAAACCGGCC TCATCGTTGC AGCCGACGAT CTCACCGCAA TGGTCGGCGC GGCAGCCGCC TACATGGACG ACCTGCCGCG GCTTGCGGCC GCCGGCGCCA ATGGTCTTGC GCGGACGGCA AAGAACTTCG CCATCGAAGG GGAAGCACGC GCGATCGGCG CGGTTTACGA CAGTCTTACG CGCTGA
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Protein sequence | MVDIRDVEVI APNFKRRLSG VTSSIIQLVP VQRALGQKIA VLGPGLPKSL PSVRFRDLIR LWKRPPGRRC RVWHARRNVE MLPAVLLRDL LRMKIRIVFT SASQRRHTGW SKFLIGRMDA VIATSARTAA YLEVPNTVIL HGIDTQRFQP PFDKAEAKQA LGLDPAKKFV GCFGRVRRQK GTDLFVDSMI ALLPGRPGWG AIVAGRATGP HAAFETELKE RVAKAGLADR ILFVGEHTNI PDWYRALDLF IAPQRWEGFG LTPLEAMATG VPVVATDVGA FSELVTVGNE ETGLIVAADD LTAMVGAAAA YMDDLPRLAA AGANGLARTA KNFAIEGEAR AIGAVYDSLT R
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