Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1249 |
Symbol | |
ID | 5322096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1340078 |
End bp | 1340548 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790190 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001326934 |
Protein GI | 150396467 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0518927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.957765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTAC GCGTCGAGCT CGATGCCATC GATATGAAAA TACTGCGCGA ACTGCAGGAT AACGGCCGTA TGACGAATGT GGAACTGGCC GAGAGGGTGG GGATTTCGGC ACCTCCCTGC CTGCGCCGGG TTCGCAAGCT CGAGGAGGCC GGCGTCATCC GGGGCTATCG CGCGCTTCTG AATGCCGCCG CGCTTGGATA TGATCTCGTT GCCTTCTGCA TGGTCGGTCT GAAGCACCAG TCCGACGCCA ATCTGAAGGC CTTTGCCGCC CGCACCGCCT CATGGCCGCT TGTTCGCGAG GCCTGGATGG TGTCCGGAGA GTCGGACTTT CTGCTGCAGT GCGTGGCCGA GAACCTTGCG AGCTTTCAGG ATTTCGTTAT TGAAGAACTG ACCGCCACCG AGAATGTCGA TACGGTGCGG ACGATGCTGA CGATCCGGCA AGTGAAGGAC GCATGTCAGG TAGAAATCTG A
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Protein sequence | MVVRVELDAI DMKILRELQD NGRMTNVELA ERVGISAPPC LRRVRKLEEA GVIRGYRALL NAAALGYDLV AFCMVGLKHQ SDANLKAFAA RTASWPLVRE AWMVSGESDF LLQCVAENLA SFQDFVIEEL TATENVDTVR TMLTIRQVKD ACQVEI
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