| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1233 |
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| Symbol | |
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| ID | 5322080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1314286 |
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| End bp | 1318077 |
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| Gene Length | 3792 bp |
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| Protein Length | 1263 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790174 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001326918 |
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| Protein GI | 150396451 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.521746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0561989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATCG AGCGTCGATT CACGAAGGCC GGGCAATCCG CCTATGCCGA AATAGAATTC
CGCAAGGCGA CGAGTGAGAT CAAGAACCCG GACGGGTCGG TGGTCTTTCG TCTCGCGGAT
ATCGACGTAC CCGCGCAGTT CTCGCAGGTC GCGGCCGACA TCCTCGCCCA GAAGTATTTC
CGCAAGGCGG GCGTGCCCGC AAAGCTGAAG CGGGTCGAGG AAAACGACGT GCCGTCCTTT
CTCTGGCGTT CGGTTCCGGA CGCCGACGCG CTGAAGGCGC TTCCGAAAGA AGAACAGTAC
GGCTCCGAAA CGGATGCTCG CCAGGTTTTC GATCGCTTGG CCGGAACCTG GGCCTATTGG
GGCTGGAAGG GTGGCTATTT CGACACGGAA GAAGACGCCA GCGCCTTCCG CGACGAGCTC
GCCTATATGC TCGCTACCCA GCGCGTCGCG CCGAATTCGC CGCAATGGTT CAACACCGGC
CTCCACTGGG CCTATGGCAT TGACGGCCCC GGCCAGGGAC ATTTCTATGT CGATCCCTTC
ACCGGCAAGC TGACGAAGTC GAAGTCCGCC TACGAACATC CGCAGCCGCA TGCCTGCTTC
ATCCAGTCCG TCGGAGACGA CCTCGTCAAC GAGGGCGGCA TCATGGATCT GTGGGTGCGC
GAAGCGCGCC TCTTCAAATA CGGCTCCGGC ACCGGCTCCA ACTTCTCCTA TGTGCGCGCC
GAGGGCGAGA AGCTCTCGGG CGGCGGCAAG TCTTCCGGCC TGATGAGCTT CCTGAAGATC
GGCGACCGCG CCGCGGGCGC CATCAAGTCG GGCGGCACGA CACGTCGCGC GGCCAAGATG
GTCGTCGTCG ACATCGACCA CCCGGATATC GAGGAATATA TCAACTGGAA GGTCAAGGAA
GAGCAGAAGG TTGCCGCCCT CGTCACCGGC TCGAAGATCG TCGCCAAGCA CCTGAAGGCG
ATCATGAAGG CCTGCATCAA TTGCGACGGC AGCGACGATG CCTGCTTCGA TCCGAAGCAG
AACCCGGCGC TGAAGCGCGA GATCCGCGCC GCAAAGCAGT CACTGGTACC GGAGAACTAT
GTCAAGCGCG TCATCCAGTT CGCGCGCCAG GGCTACAAGG ACATCGAATT CAAGACTTAC
GACACGGATT GGGATTCGGA GGCCTATCTC ACCGTTTCCG GCCAGAACTC CAACAATTCC
GTCTCGATCA AGGACGATTT CCTTCGCGCC GTGGAAGCGG ATGGCGATTG GCACCTGACC
GCCCGCAAGG ACGGCCGCGT CATGAAGACC CTGAAGGCGC GCGACCTCTG GGAGTCGATC
TCGCATGCCG CCTGGGCCTC CGCCGATCCG GGCCTGCACT TCAACACGAC GATGAACGAT
TGGCACACCT GCCCCGCTGC GGGGCCGATC CGCGCATCGA ACCCGTGCTC GGAATACATG
TTCCTCGACG ACACGGCGTG CAATCTCGCA TCGCTCAACC TGATGCAGTT CAAGGATGCC
GCGAACAAGC GGATCAATAT CGGCGACTAC GAGCATGCCG TCCGCCTTTG GACGGTCGTT
CTCGAAGTCT CGGTGATGAT GGCTCAGTTC CCCTCCCGCG AGATCGCCGA ACTTTCCTAT
GCCTATCGCA CGCTCGGCCT CGGCTATGCC AATATCGGCG GCCTTCTGAT GTCGTCCGGC
ATTCCCTATG ACTCGCCCGA GGGCCGCGCC ATCGCCGGCG CATTGACCGC GATCATGACC
GGTGTCGCCT ATGCCACCTC GGCCGAGATT TCCGCAAAGC TCGGCCCCTT CCCCGGATTT
GCGCCGAACC GCGACAACAT GCTGCGCGTC ATGCGCAATC ACCGGCGCGC CGCTTATGGC
GAGACCGCCG GTTATGAGGG CCTGTCCGTC AACCCGGTCG CGCTCGTCCA TGGCGATTGC
CCGGACCAGG ACCTGATCGC CCATGCAAAG AGCGCCTGGG ACCAGGCGGT CGAGCTCGGA
GAGAAGCACG GCTACCGCAA CGCCCAGGCC ACGGTGATCG CGCCGACCGG TACGATCGGG
CTCGTCATGG ATTGCGACAC GACCGGCATC GAACCCGATT TCGCCCTGGT GAAATTCAAG
AAGCTCGCCG GCGGCGGCTA CTTCAAGATC ATCAACCGTG CGGTTCCCGA GGCGCTGCGC
ACGCTCGGCT ATTCGGAAAG CCAGATCGCC GAGATGGAGG CTTATGCCGT CGGCCACGGC
AATCTCAACC AGGCACCGGC CATAAATCCC ACGACGCTGA AGGTCAAGGG CTTCACCGAC
GAGAAGATCG AAGCCGTCAA CGCGGCACTG AAGGCTGCCT TCGACATCAA GTTCGTCTTC
AACCAGTGGA CGCTGGGTGC AGATTTCCTC AAGGGCACGC TGCAGGTCAG CGATGAGCAG
CTTGCATCGG TGGACTTCAA CCTGCTCGAG CATCTGGGCT TCTCCAGGAA GGACATCGAA
ACCGCCAACA TCCATGTCTG CGGCGCGATG ACGCTCGAAG GCGCACCCTT CCTGAAAGCG
GAGCACCTGC CTGTCTTCGA CTGCGCCAAT CCCTGCGGCA AGATCGGCAA GCGCTATCTT
TCAGTCGAAA GCCACATCCG CATGATGGCG GCTGCCCAGC CCTTCATCTC GGGCGCAATC
TCCAAGACGA TCAACATGCC GAACGAGGCG ACCGTCGAGG ACTGCAAGAA CGCCTATATG
CTTTCCTGGA AGCTCGCGCT GAAGGCCAAT GCGCTCTACC GCGACGGCTC CAAGCTCTCG
CAGCCGCTCA ACTCCTCGCT GATCGAGGAC GAGGAAGACG AGGATGCGAT CGAAGACCTG
ATGCAGGCAC CGGCCGCCGC CCAGGCCGTC GCCATCACCG AGAAGATCGT GGAGCGCGTC
ATCGAGAGGG TGGTGCGTGC CCGCGAGAAG CTGCCGAACC GCCGTCAGGG CTACACCCAG
AAAGCGGTCG TCGGCGGTCA CAAGGTATAT CTGCGCACCG GCGAATTCGG CGACGGGCGC
CTTGGCGAGA TCTTCATCGA CATGCACAAG GAAGGTGCGG CCTTCCGGGC GATGATGAAC
AACTTCGCCA TCGCCATCTC GCTCGGCCTG CAATATGGCG TGCCGCTCGA GGAATATGTT
GAGGCCTTCA CCTTCACCAA ATTCGAGCCG GCCGGCATGG TCCAGGGCAA TGACGCCATC
AAGAACGCGA CGTCGATCCT CGACTACGTC TTCCGCGAAC TTGCCGTGTC TTATCTCGGC
CGTCACGACC TTGCTCATGT CGATACCTCC GACTTCAGCA ACACCGCGCT CGGCCGCGGC
ATTCAGGAAG GCAAGACCAA CCTCGTCTCG ACCGGCTGGA CCCGCGGCTA CAAGCCGTCG
ATCGTCGGTG GCACGGGCGA GCGCTCCGAG CCGAAGGGTG CCGCAACCGC CGCCCCCGCC
CGCGCCTCCG GCGGCGCGTC GGTAACCTCG ATCTCCGGCA ATGCCGTGCG CAAGCTGGAG
CCGGCAATCG CCGCCGCCTC CTCCGAAGTC GTCGCCTTCA AGCGCGACTA CGAGGAACGA
GCCGTCGAAC TCGCCGAGGA GATCGCCGAA GAAGCGGAAC AGGAAGTGAC CGCCCTCTTC
TCCGACAAGG CTGCGGCAGA GGCCGCTGCG GCAAAGTCGG AGGCAAAGAA GGTGGAAGCC
GAGCGCCGCG CCCGCTCGAT CATGCAGGGC TATACCGGCA ACATGTGCTC CGAATGCCAG
AACTTCACGA TGGTGAGGAA CGGGACGTGC GAGAAGTGCG ACACGTGCGG TGCGACGAGC
GGGTGCTCGT GA
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| Protein sequence | MRIERRFTKA GQSAYAEIEF RKATSEIKNP DGSVVFRLAD IDVPAQFSQV AADILAQKYF
RKAGVPAKLK RVEENDVPSF LWRSVPDADA LKALPKEEQY GSETDARQVF DRLAGTWAYW
GWKGGYFDTE EDASAFRDEL AYMLATQRVA PNSPQWFNTG LHWAYGIDGP GQGHFYVDPF
TGKLTKSKSA YEHPQPHACF IQSVGDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSYVRA
EGEKLSGGGK SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDIDHPDI EEYINWKVKE
EQKVAALVTG SKIVAKHLKA IMKACINCDG SDDACFDPKQ NPALKREIRA AKQSLVPENY
VKRVIQFARQ GYKDIEFKTY DTDWDSEAYL TVSGQNSNNS VSIKDDFLRA VEADGDWHLT
ARKDGRVMKT LKARDLWESI SHAAWASADP GLHFNTTMND WHTCPAAGPI RASNPCSEYM
FLDDTACNLA SLNLMQFKDA ANKRINIGDY EHAVRLWTVV LEVSVMMAQF PSREIAELSY
AYRTLGLGYA NIGGLLMSSG IPYDSPEGRA IAGALTAIMT GVAYATSAEI SAKLGPFPGF
APNRDNMLRV MRNHRRAAYG ETAGYEGLSV NPVALVHGDC PDQDLIAHAK SAWDQAVELG
EKHGYRNAQA TVIAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYFKI INRAVPEALR
TLGYSESQIA EMEAYAVGHG NLNQAPAINP TTLKVKGFTD EKIEAVNAAL KAAFDIKFVF
NQWTLGADFL KGTLQVSDEQ LASVDFNLLE HLGFSRKDIE TANIHVCGAM TLEGAPFLKA
EHLPVFDCAN PCGKIGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNEA TVEDCKNAYM
LSWKLALKAN ALYRDGSKLS QPLNSSLIED EEDEDAIEDL MQAPAAAQAV AITEKIVERV
IERVVRAREK LPNRRQGYTQ KAVVGGHKVY LRTGEFGDGR LGEIFIDMHK EGAAFRAMMN
NFAIAISLGL QYGVPLEEYV EAFTFTKFEP AGMVQGNDAI KNATSILDYV FRELAVSYLG
RHDLAHVDTS DFSNTALGRG IQEGKTNLVS TGWTRGYKPS IVGGTGERSE PKGAATAAPA
RASGGASVTS ISGNAVRKLE PAIAAASSEV VAFKRDYEER AVELAEEIAE EAEQEVTALF
SDKAAAEAAA AKSEAKKVEA ERRARSIMQG YTGNMCSECQ NFTMVRNGTC EKCDTCGATS
GCS
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