| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1211 |
|---|
| Symbol | |
|---|
| ID | 5322058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1293918 |
|---|
| End bp | 1294742 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640790152 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001326896 |
|---|
| Protein GI | 150396429 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.12295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.414584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCT GGTTCATAAC CGGAGCGTCG CGCGGTTTTG GCGCCCGTAT TGCGCAGCTT
GCTCTCGAGC GCGGCGATAA TGTCGTCGCG ACAGCGCGCA ACGTGGTGCC GATAAAGGAA
AATCTAGGCG ATCGGCCGAA CCTTCTTGCG GCGGCACTCG ACGTGGCGAA CGAACAGCAA
GCCCGAGATG CAGCTCGGCA GGCAGTCGAG CGATTCGGCT CCATTGATGT CCTGCTGAAC
AATGCGGGCT TCGGCCTCAT CGGGGCAGTC GAGGAGGCGA CGGCCGAAGA GATTGAACGC
CTCTATCGGA CCAATGTGTT CGGTCTGCTG ACCGTGACGC GAGCGGTGCT GCCGCAGATG
CGGGCACAGC GATCAGGTCG GGTCCTGAAC ATCTCGTCGA TCGGCGGCTA TCGTGCAGGC
GCAGGCTTCG GTGTCTACTG CTCGACGAAG TTCGCTGTCG AAGGGCTGTC GGAGGCGCTC
CATGCAGAAC TGGCACCCCT CGGGATCCAT GTGACCGTGA TCGAGCCAGG ATACTTCAGG
ACCGACTTCC TCGACTCCAG CTCGTTGTCG GTGAGCGGAA ATCGCATAGC CGATTACGAT
AGCACGGCTG GAGCGGTCCG CGAGCACGCA TCTGCCATGA ACCACAACCA GCCGGGTGAT
CCCGAGAAGT TCGCTCGACA GCTCGTCGCG TTCGCAGATG TCGCCGACCC ACCAGTCAGG
GTGCCATTCG GAAGCGATAC TGTCGCGGCA ATCGAGGCCA AGCACGCCTC GGACGCGGAA
ACAATCAGGA AATGGAGGCA GGTTTCACTC TCGACGGACT ACTGA
|
|---|
| Protein sequence | MKTWFITGAS RGFGARIAQL ALERGDNVVA TARNVVPIKE NLGDRPNLLA AALDVANEQQ
ARDAARQAVE RFGSIDVLLN NAGFGLIGAV EEATAEEIER LYRTNVFGLL TVTRAVLPQM
RAQRSGRVLN ISSIGGYRAG AGFGVYCSTK FAVEGLSEAL HAELAPLGIH VTVIEPGYFR
TDFLDSSSLS VSGNRIADYD STAGAVREHA SAMNHNQPGD PEKFARQLVA FADVADPPVR
VPFGSDTVAA IEAKHASDAE TIRKWRQVSL STDY
|
|---|
| |