Gene Smed_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1193 
Symbol 
ID5322040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1275242 
End bp1275967 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID640790134 
Producthypothetical protein 
Protein accessionYP_001326878 
Protein GI150396411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.226627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.38143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACTT TGAAATATGG GACATCGCTC ACGCTTGATG AGGCTGCCGA CCGCTACGAC 
GTGGCGTGGG TTCGTCCCAG CCAGTCCACG GGCCGCATCC AGCCCACGCC GCGCACGCGT
GGCTCAGTGC GTGGCCATCT GGTGGACTTC ACGACCAACC GAGCGCTTGG CTATCACAGC
ACGCTCGAGC AGCGTCTCGG CACCATGCTG AGCGCGGATC CTGCCGTCAT CGATCTGGAA
GACCAGCCCT CCCCCGTCCT CAACTACCAG TTCCCAGGAG AGAACAAAGT GCACGAGCAT
ACCTTCGACT TCCGCGCCAC CTTTTCCAGT GGCGTCCGCA TCGCCTACGC TGTCAAGCCG
CTGAAGAAGG TGAAGTCTTC GCGCATCCAC GAGATCGTCG ACCTGATCAA GGTGCAGTCG
CTGCGCGGTT TCGCGGACAT TGCGGTTGTC GCTACCGAGG AGCAGATCAC CCAGGAGAAA
TGCGACAATG CCGAAGAAGT CAACGAAGCC CGCCGCTCGC GGGTTCAGCG GGACTGCGAC
GCCGTCCTTG CGCATCTCCG GAGTTACGAC GGTGCGGTGT CCATGATCGA TGTCGCCGAC
GGCTCCGACG ACCCTGGTCG CACGCGCATT GCGATCCTGT GCCTGATCTA CGACGGACTC
GTGAAGCACC TGGACCCGTT CCAGCGTTTC GACGACGCTC CGATGATCGT CGCAAGCTTC
CACTAG
 
Protein sequence
MGTLKYGTSL TLDEAADRYD VAWVRPSQST GRIQPTPRTR GSVRGHLVDF TTNRALGYHS 
TLEQRLGTML SADPAVIDLE DQPSPVLNYQ FPGENKVHEH TFDFRATFSS GVRIAYAVKP
LKKVKSSRIH EIVDLIKVQS LRGFADIAVV ATEEQITQEK CDNAEEVNEA RRSRVQRDCD
AVLAHLRSYD GAVSMIDVAD GSDDPGRTRI AILCLIYDGL VKHLDPFQRF DDAPMIVASF
H