Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1193 |
Symbol | |
ID | 5322040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1275242 |
End bp | 1275967 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790134 |
Product | hypothetical protein |
Protein accession | YP_001326878 |
Protein GI | 150396411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.226627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.38143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACTT TGAAATATGG GACATCGCTC ACGCTTGATG AGGCTGCCGA CCGCTACGAC GTGGCGTGGG TTCGTCCCAG CCAGTCCACG GGCCGCATCC AGCCCACGCC GCGCACGCGT GGCTCAGTGC GTGGCCATCT GGTGGACTTC ACGACCAACC GAGCGCTTGG CTATCACAGC ACGCTCGAGC AGCGTCTCGG CACCATGCTG AGCGCGGATC CTGCCGTCAT CGATCTGGAA GACCAGCCCT CCCCCGTCCT CAACTACCAG TTCCCAGGAG AGAACAAAGT GCACGAGCAT ACCTTCGACT TCCGCGCCAC CTTTTCCAGT GGCGTCCGCA TCGCCTACGC TGTCAAGCCG CTGAAGAAGG TGAAGTCTTC GCGCATCCAC GAGATCGTCG ACCTGATCAA GGTGCAGTCG CTGCGCGGTT TCGCGGACAT TGCGGTTGTC GCTACCGAGG AGCAGATCAC CCAGGAGAAA TGCGACAATG CCGAAGAAGT CAACGAAGCC CGCCGCTCGC GGGTTCAGCG GGACTGCGAC GCCGTCCTTG CGCATCTCCG GAGTTACGAC GGTGCGGTGT CCATGATCGA TGTCGCCGAC GGCTCCGACG ACCCTGGTCG CACGCGCATT GCGATCCTGT GCCTGATCTA CGACGGACTC GTGAAGCACC TGGACCCGTT CCAGCGTTTC GACGACGCTC CGATGATCGT CGCAAGCTTC CACTAG
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Protein sequence | MGTLKYGTSL TLDEAADRYD VAWVRPSQST GRIQPTPRTR GSVRGHLVDF TTNRALGYHS TLEQRLGTML SADPAVIDLE DQPSPVLNYQ FPGENKVHEH TFDFRATFSS GVRIAYAVKP LKKVKSSRIH EIVDLIKVQS LRGFADIAVV ATEEQITQEK CDNAEEVNEA RRSRVQRDCD AVLAHLRSYD GAVSMIDVAD GSDDPGRTRI AILCLIYDGL VKHLDPFQRF DDAPMIVASF H
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