Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1173 |
Symbol | |
ID | 5322019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1250772 |
End bp | 1251104 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790114 |
Product | preprotein translocase, YajC subunit |
Protein accession | YP_001326859 |
Protein GI | 150396392 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.441411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.139659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTATTA CCGAAGCTTT CGCGCAGACG GCGGCCCCTG GGGGCGGCGG CGCCGATATT CTGATGTCCA TCCTGCCATT CCTGCTGATT TTCGTGGTCA TGTATTTCCT GATCATCCGG CCGCAGCGTG CACAGATGAA GCGCCGCGAA GAACTGCTGA AGAACATCCG GCGCGGCGAT CAGGTCGTCA CCGGCGGTGG TATCGTCGGC AAGGTGACCA AGGTCGTCGA CGATACCGAA CTCGAGGTGG AAATCGCCGA GGGCACTAAG GTCCGCGTCG TCCGCAGCGG CGTTTCCGAA GTTCGCGTGA AGGGCGAGCC CGTCAAGGAA TAG
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Protein sequence | MFITEAFAQT AAPGGGGADI LMSILPFLLI FVVMYFLIIR PQRAQMKRRE ELLKNIRRGD QVVTGGGIVG KVTKVVDDTE LEVEIAEGTK VRVVRSGVSE VRVKGEPVKE
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