Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1167 |
Symbol | |
ID | 5322013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1243773 |
End bp | 1245056 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790108 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001326853 |
Protein GI | 150396386 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0695975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.170657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATA TCAAATGGAT CCGTGAGAAT GCAGACGTCC TCGATAGCGC CCTGGCGAAA CGGGGTGCGG GGCCATTGTC GGCATCCCTG ATCGCTCTTG ACGAGCGCCG CCGGACAATT CTGCAGTCGC TGCAGGACAT GCAGTCCCGC CGCAATGCCG CGTCCAAGGA AATCGGCGCC GCAATGGCCC AGAAGAACAG CGAGTTGGCA GACAGGCTCA AGGCCGAAGT CGCCGAGCTC AAGACCACGC TGCCGGCCGC CGAAGAGGAA AGCCGACGGA TCGAAGCCGA GCTTACCGAT GCGCTGTCGC GCATTCCCAA TGCACCGCTC GACGATGTTC CCGTCGGAGC GGACGAAAGC GCAAACGTCG TAACACGTGT GGTCGGGGCC AAGCCCACAT GGAACCACAA GCCGCTCGAG CATTTTGAGA TCGGCGAAGC GCTGGGACTG ATGGACTTCG AAGGAGCGGC GAGAATCGCC GGGTCGCGCT TCACGATCCT CAAAGGTCAG CTCGCGCGCC TGGAACGCGC GCTCGGCCAG TTCATGCTCG ACCTACACAC AGGGGAACAT GGGTACATCG AGGTTCAGCC TCCGTTGCTC GTCCGCGACG ATGCGATGTA TGGCACCGGC CAGCTGCCGA AATTCACTGA TGATCTCTTC CGCACGACTG ATGGACGCTG GTTGATCCCG ACGGCTGAAG TCCCGCTGAC GAACATGGTC CGGGAACAGA TCCTCGACGG CGAAAAGCTG CCGCTGCGCT TTACGGCCTT GACCCCATGC TTCCGCTCCG AGGCCGGCTC CGCCGGCCGT GACACCCGAG GTATGTTGCG CCAGCATCAG TTCAATAAAG TCGAACTGGT GTCGATCACG GATGCCGAGA GCGCGCTCGA CGAACACGAG CGGATGACTG CTTGTGCCGA GGAGGTACTT AAGCGTCTCG GCCTGCATTA CCGTGTGATG ACGCTTTGCA CCGGCGACAT GGGATTTAGC GCTCGCAAGA CGTACGATCT CGAGGTCTGG CTGCCGGGAC AGGACGCCTA TCGCGAGATT TCTTCGTGCT CGGTCTGCGG CGATTTTCAA GGCCGCCGAA TGAACGCGCG TTACCGCGGA AAAGAAGAAA AGGGGACGAA GTTCGCCCAC ACGCTGAACG GTTCCGGCGT CGCCCTCGGC CGGGCGCTGA TCGCCGTCAT CGAGAATTAC CTGAATGAGG ACGGCTCTAT CACCGTGCCA GACGCCCTCA TAGCCTACAT GGGCGGCCTG CGACGGATCG AGAAGGCTGC TTAG
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Protein sequence | MLDIKWIREN ADVLDSALAK RGAGPLSASL IALDERRRTI LQSLQDMQSR RNAASKEIGA AMAQKNSELA DRLKAEVAEL KTTLPAAEEE SRRIEAELTD ALSRIPNAPL DDVPVGADES ANVVTRVVGA KPTWNHKPLE HFEIGEALGL MDFEGAARIA GSRFTILKGQ LARLERALGQ FMLDLHTGEH GYIEVQPPLL VRDDAMYGTG QLPKFTDDLF RTTDGRWLIP TAEVPLTNMV REQILDGEKL PLRFTALTPC FRSEAGSAGR DTRGMLRQHQ FNKVELVSIT DAESALDEHE RMTACAEEVL KRLGLHYRVM TLCTGDMGFS ARKTYDLEVW LPGQDAYREI SSCSVCGDFQ GRRMNARYRG KEEKGTKFAH TLNGSGVALG RALIAVIENY LNEDGSITVP DALIAYMGGL RRIEKAA
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