Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1154 |
Symbol | |
ID | 5322000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1228596 |
End bp | 1229387 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790095 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001326840 |
Protein GI | 150396373 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.311062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG CCACATGGAA CATCAACGGC GTCAAGGCGC GTCTCGACGG CCTCGTGGGC TGGCTAAAGG AATCAAATCC CGACATCGCC TGTCTGCAGG AGATCAAGTC CATTGACGAC GCATTTCCGA GAGGTGAGAT CGAGTCGCTC GGCTATCATG TCGAAACGCA CGGTCAGAAG GGATTCAATG GCGTTGCGCT GCTTTCCAAG CTGCGACCGG ACGAGGTCAA TCGCGGATTG CCGGGGGACG CTTCCGACGA ACAGTCACGC TTTATCGAAG GCGTGTTCTC GGTCAACGGC GGTGCGCTAC GCGTCTGCTG CCTCTATTTG CCGAACGGAA ATCCGGTAGA GACGGAAAAA TACCCCTACA AGCTTGCATG GATGCGGCGC CTCGCCGCCT TTGCGGAACA AAGGCTCATG CTCGAGGAAC CACTCATCCT CGCCGGTGAC TACAATGTCA TTCCGGAGCC TCATGACTGC TGGGACGTCA AGGTCTGGCG TAACGACGCC CTGTACCTGC CCGAGACCCG CGCCGCCTTC CGCCGTCTGC GCAATCTTGG TTTCACCGAC GCCGTGCGCG CGACCTCCGA CGAGGCGCCG CTCTATTCGT TCTGGGATTA TCAGGCCGGC TGCTGGCCGA AGAATCTCGG CATCCGCATC GACCACCTGA TGCTGTCGCC GGAGGCGGCC GACAAGCTCG TGTCGACCTC TATCGAGAAG CACGTCCGAT CCTGGGAAAA GCCGTCCGAC CACGTACCTG TGACGGCTGA ATTCGCATTC GAGATCGCTT AG
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Protein sequence | MKIATWNING VKARLDGLVG WLKESNPDIA CLQEIKSIDD AFPRGEIESL GYHVETHGQK GFNGVALLSK LRPDEVNRGL PGDASDEQSR FIEGVFSVNG GALRVCCLYL PNGNPVETEK YPYKLAWMRR LAAFAEQRLM LEEPLILAGD YNVIPEPHDC WDVKVWRNDA LYLPETRAAF RRLRNLGFTD AVRATSDEAP LYSFWDYQAG CWPKNLGIRI DHLMLSPEAA DKLVSTSIEK HVRSWEKPSD HVPVTAEFAF EIA
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