| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1099 |
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| Symbol | |
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| ID | 5321945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1168901 |
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| End bp | 1170355 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640790040 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001326785 |
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| Protein GI | 150396318 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.656193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA AACTATCCGT CTTTCCGGCC TTCTTTCGCG TCGCGCAGAA AAGCGTGGCG
GTGTTCGGCA ATGGGGACGA GGCCTTCGCC AAGGTGCGGC TGCTGCTGAG TACCGAGGCG
CGCATCGTCG CCTATGCGGA TCAGCCCGAG GCGGCTTTCG AAGCGTTCCT GAATGCCAAC
GGTATCGATA CCATCCGCAA GCCTTTTGAT GCTCGCCAGG TCGAGGGCGC CGTTCTCGTC
TTCGCGGCAA CGGGCGATGC GGCTTTCGAC AGGATCATCG TGGCCGCGGC GCGGGAACGG
AAAATCCCCG CAAATGCCGT CGACCAGCCG GACTACTGCG ATTTTCTGAC GCCCGCACTC
GTCAACCGCG CGCCTGTGGC CGTTGCGATC GGCACGGAAG GGGCGGGGCC GGTTCTGGCG
CAGATGATTC GCGCGCAGAT CGATCAGTTG CTCTCGCCGT CGCTGGGCAT CGTTGCTTCA
TTGGCGGCAA GCTATCGCGA CGCCGTCGAT CGCCTCGTTC CGCGCGGTGT CGCACGCCGA
GTCTTCTGGC GGCGCTTCTT CTCCGGTCCG GTGGCCGATC ACGTCGCACT TGGCGATCTT
GCATCCGCAC GCCGCGAGGC CTCGAAGCTT CTGGATGCGG CCGGTGGCGT ACGCGGTCAT
GTCTGGCTCG TCGGCGCCGG TCCCGGTGCG GAAGACCTAC TGACGCTCAG AGCCCAGCGC
GTTATGATGG AAGCGGACGC GATCGTCTAT GATGCGCTGG TGCCGCAGGC GATCGTCGAC
ATGGGCCGCC GCGACGCCGA GCGGCTGTCG GTCGGCAAGC GCAAGGGCTG CCACACCAAG
TCGCAGGATG AGATCAATCA TTTGCTGGTG AGGCTCGCCG GCGAGGGCAA GCGTGTCGTT
CGGCTGAAAT CGGGGGATCC TCTCGTTTAC GGTCGGGCCG GTGAGGAAAT GGCGGCGATG
CGCGAGGCGG GCATCAGCTA CGAGGTGGTG CCGGGGATCA CGTCCGCCTT TGCTGCGGCC
GCCGATTTCG AGTTGCCGCT GACACTGCGC GGCGTGGCGT CGTCACTGGT TTTCACGACC
GGGCACGACT TGACCGGCAG CGTCCTTCCC GATTGGGCGC GGCTGGCGGT TTCCGGCGCG
ACGATCGCGG TCTATATGGG GCGCACTGTT GCGGCGTCCG TCGCTTCGCG ACTCATGCAG
GCGGGCCTGC CGCAGGACAC GACCGTCGCG GTCATCGAAA ATGCGAGCCG CGCCGAGCGA
CGCCTACTTC ACGGAACCTT GCGTGATCTC CCTGACCTCG AGACCCGCAC GGAACTGGAC
GGGCCGGTCA TGGTGATCAT CGGCGAAGCG GTCGCGGGCG CGAATTTCGA ACGGTCCGAG
CCGCTGGCGG CGGCCCGGGG CAATGGCAGC GGTGCCGTCG AGGCTTCGGC GAAACGCGAA
ACGATTTGGA ATTGA
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| Protein sequence | MPQKLSVFPA FFRVAQKSVA VFGNGDEAFA KVRLLLSTEA RIVAYADQPE AAFEAFLNAN
GIDTIRKPFD ARQVEGAVLV FAATGDAAFD RIIVAAARER KIPANAVDQP DYCDFLTPAL
VNRAPVAVAI GTEGAGPVLA QMIRAQIDQL LSPSLGIVAS LAASYRDAVD RLVPRGVARR
VFWRRFFSGP VADHVALGDL ASARREASKL LDAAGGVRGH VWLVGAGPGA EDLLTLRAQR
VMMEADAIVY DALVPQAIVD MGRRDAERLS VGKRKGCHTK SQDEINHLLV RLAGEGKRVV
RLKSGDPLVY GRAGEEMAAM REAGISYEVV PGITSAFAAA ADFELPLTLR GVASSLVFTT
GHDLTGSVLP DWARLAVSGA TIAVYMGRTV AASVASRLMQ AGLPQDTTVA VIENASRAER
RLLHGTLRDL PDLETRTELD GPVMVIIGEA VAGANFERSE PLAAARGNGS GAVEASAKRE
TIWN
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