Gene Smed_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1097 
SymbolmazG 
ID5321943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1167251 
End bp1168087 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID640790038 
Productnucleoside triphosphate pyrophosphohydrolase 
Protein accessionYP_001326783 
Protein GI150396316 
COG category[R] General function prediction only 
COG ID[COG3956] Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain 
TIGRFAM ID[TIGR00444] MazG family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.122296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.526652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCT CCCGAGACAT TCAAAGCCTG CTCGACATCA TGGCCGCCCT CCGCCACCCG 
GAGAAAGGTT GCCCCTGGGA CATTGTCCAG ACATTCGAGA CGATCCGGCC TTATACGATC
GAAGAGGCCT ATGAGGTCGC GGACGCGATC GAGCGTCACG ATATGGACGA CCTCTGCGAT
GAGCTCGGCG ACCTCTTACT GCAGGTGGTC TTTCACGCGC GCATGGCCGA AGAGGCCGGA
GAATTTTCCT TTGGAGACGT GGTCGAGGCC ATAACGCGCA AGATGATCCG CCGCCATCCG
CATGTTTTCG CCCGCTCCTA TGCGGACACC GCCGAGGCGG TAAAGCTGCA ATGGGAAGAG
ATCAAGCAGG CCGAAAAGGC CGACCGCCGG CAGCGCCGGT TACGGCGCGG CTTGCCGCAA
GAGGAAGAAC AGGCGGGTCA TCTCGGATCG ATCCAACGCA GCTTTCCGGC TCTGGTGGAG
GCGCTGAAGC TTCAGGAGAG GGCGGCAAAA GTCGGCTTCG ACTGGTCCGA GCCCGAGCCG
ATCCTCGACA AGGTCGAAGA GGAAATAGCC GAACTGCGGC AGGCGTTGAA ATCCGGCGAT
CAGGGCAAGG TCGCGGACGA ACTCGGCGAT CTGATTTTCG CGCTCGTCAA TATCGGCCGC
CATGTAGGCA CCGACCCTGA AATGGCGCTG CGCGGGACGA ATACCAAATT CCGGCGACGC
TTCGGCCATA TAGAGAAGGA GCTGGAAGCC GGAGGCGAAA CGCTCGACGC CGCATCGCTG
GAGCGTATGG AAGAACTCTG GCAGGCGGCG AAGGCTATCG AAAGGCAGCT GAGGTAA
 
Protein sequence
MEASRDIQSL LDIMAALRHP EKGCPWDIVQ TFETIRPYTI EEAYEVADAI ERHDMDDLCD 
ELGDLLLQVV FHARMAEEAG EFSFGDVVEA ITRKMIRRHP HVFARSYADT AEAVKLQWEE
IKQAEKADRR QRRLRRGLPQ EEEQAGHLGS IQRSFPALVE ALKLQERAAK VGFDWSEPEP
ILDKVEEEIA ELRQALKSGD QGKVADELGD LIFALVNIGR HVGTDPEMAL RGTNTKFRRR
FGHIEKELEA GGETLDAASL ERMEELWQAA KAIERQLR