| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1091 |
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| Symbol | |
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| ID | 5321937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1159461 |
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| End bp | 1161734 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790032 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001326777 |
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| Protein GI | 150396310 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.414611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGATG GAATGGCCTT GCCATTGGGC ACGGAGGACG GAGTCACTGC TGCCCAGGAC
AGGCGAGCCT CATTCGCCTT GCCGGGGCTC ATGCTTGCCA CCGGTGCCCT GGTCTGCGCC
ACCTTGTCGC TGCTCGTTCT TCTTGGCCTG ACCCCGGTCC GGCCTGAGAG AAACATCGTT
ATCGCCTGTG CCGGCGTCAA CGGCCTGTTC GTCGTGGGGC TGATCTATCT CATCGCCCGC
GAGATATTCA GGCTGCTCAG GGCACGCAGC AAAGGCAGGG CCGCCGCGCG CCTGCATGTC
CGCATCGTCG CACTCTTTTC GATCGTCGCG ATCACGCCGG CCATCCTCGT CGCCATCTTC
GCCAGCATCA CTCTCGATGT GGGCCTCGAC CGCTGGTTCT CGCTGCGTAC GCAGGCGATC
GTCCGTTCCT CGCTGAACGT CGCCCAGGCC TATGTCCTTG AGAATGCCAG TTACCTGCAG
GGCCAGACGG TCTCGATGGC CAACGATCTG GAGCGCAATC GTCAGCTCTA CAGCCTCGAC
CGCACAGGCT TCGTCGAGCT GATGACGCGG CAGGCGAGGG GCAGAGGCAT GCTTGGCGCT
TTCCTCGTGC GCGCTGACGG CAGCGCCATA CTTCAGGCCA ATATCTCGAC CGACCGTCCG
CTGCCTGCGA TCCCGCAGGA CGCGCTGAAA AGCACTGTCT CGGGTCAACC GACCCTCATT
CCTCCCGGCG TGACCAATCT GGTGGGAGCG GTCATTCCGC TGGAGAACAT CCCCGGTACC
TATCTCTACA CCGTCCGCAA CGTCGATCCC GAAGTCATGC GGTCGATGCG GCTGATGGAA
GAGAACACTG CGGAATACAA GACCTTGGAG GCCGGGCGCA CTTCCCTTCA GATCGCCTTC
GGCGTCCTTT ACATCGGCTT CGCCCTGATC GTGCTGCTGG CGGCGATCTG GACCGCCATC
GCGGTCGCCG ACCGCATCGT GCGTCCGATC CGCCAGTTGA TCGGCGCGGC TGACAGCGTC
GCTTCCGGCA ATCTCGACGT CGTCGTACCC GTGCGCGCGG TCGACGGCGA CGTCGGCAAT
CTGTCGCGCA CGTTCAACAA GATGGTGAGC GAAATCCGGA CGCAGCAGGA TCAAATTCTC
GTAGCGAAGG ACGAGGTCGA CCAGCGCCGC CGGTTTATCG AGGCCGTGCT TTCCGGCGTG
ACGGCGGCAG TCATCGGCGT CGGCAGGGAT CGTCGCATCA CCATTTTCAA TCCGTCTTCG
GAAGGGGTGC TCAGGAAAGC GGCGCCGGGG CTGATCGGCG CGCGGCTAAG TGATGTGGCC
CCGGAAATCG AAGCGGTGCT CGTGGAGGCG GAGAGCCGCT ACCGCAACGA CTACCGCAAG
CAGATCAACA TCATGCGCGG CGGGACCGAG CGTACGATGA ATGTTCAGGT GACGCAGGAA
GAAGGTGATG AGTCGCATGG TTCCTATGTG ATCACCATCG ACGACATCAC CGATCTGGTC
ATTGCGCAGC GCTCCACCGC CTGGGCGGAT GTCGCTCGCC GCATCGCGCA CGAGATCAAG
AACCCCCTGA CGCCGATTCA GCTTTCCGCC GAGCGGCTGA AGCGCCGCTA CGGCAAACAG
ATCAATCAGG ACGACAGAGC GGTTTTCGAC CAGTGTACCG AAACGATCGT GCGCCAGGTC
GAGGATATCG GCCGGATGGT CGATGAGTTC TCCGCCTTTG CGCGCATGCC CAAGCCGACG
AAGGAAGAGT CCGATCTGCG GGCCATCCTC AAGGACGCCG TATTCCTGCG CGAGATGGGC
AACAATCACA TCGCCTTCAT CCGGGATTTC GGCGACGAAC CGCTCGAGGG CCAGTTCGAC
GGCCGCATGC TGGGCCAGGC ATTTGGTAAC CTGGTCAAGA ACGCCGTGGA ATCGATCGAA
GCCGTCCCCG CGGGGTCGTC GCGAGGTGCG CCGACGGTGG TCATTCGATC CCGTCGCGAT
GATGCGACCG GCCGTTTCGT GGTCGACGTC GTCGACAACG GCAAGGGGCT TCCGACCGAG
AACCGGCACC GGATTCTCGA GCCTTACATG ACCATGCGGG AGAAGGGCAC CGGTCTCGGC
CTCGCTATCG TCAAGAAAAT CATCGAGGAC CACGGCGGGC AACTGGAGCT GCACGACGCA
CCGTCGGATT TCGACGGCGG CGCCGGGGCG ATGATCCGGG TGATCCTGCC GCCTGCCGGC
GAGACCGGCG GTGAACATAA TTTGAAGGAT AAGGGTAATT TCAATGGCGG CTGA
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| Protein sequence | MVDGMALPLG TEDGVTAAQD RRASFALPGL MLATGALVCA TLSLLVLLGL TPVRPERNIV
IACAGVNGLF VVGLIYLIAR EIFRLLRARS KGRAAARLHV RIVALFSIVA ITPAILVAIF
ASITLDVGLD RWFSLRTQAI VRSSLNVAQA YVLENASYLQ GQTVSMANDL ERNRQLYSLD
RTGFVELMTR QARGRGMLGA FLVRADGSAI LQANISTDRP LPAIPQDALK STVSGQPTLI
PPGVTNLVGA VIPLENIPGT YLYTVRNVDP EVMRSMRLME ENTAEYKTLE AGRTSLQIAF
GVLYIGFALI VLLAAIWTAI AVADRIVRPI RQLIGAADSV ASGNLDVVVP VRAVDGDVGN
LSRTFNKMVS EIRTQQDQIL VAKDEVDQRR RFIEAVLSGV TAAVIGVGRD RRITIFNPSS
EGVLRKAAPG LIGARLSDVA PEIEAVLVEA ESRYRNDYRK QINIMRGGTE RTMNVQVTQE
EGDESHGSYV ITIDDITDLV IAQRSTAWAD VARRIAHEIK NPLTPIQLSA ERLKRRYGKQ
INQDDRAVFD QCTETIVRQV EDIGRMVDEF SAFARMPKPT KEESDLRAIL KDAVFLREMG
NNHIAFIRDF GDEPLEGQFD GRMLGQAFGN LVKNAVESIE AVPAGSSRGA PTVVIRSRRD
DATGRFVVDV VDNGKGLPTE NRHRILEPYM TMREKGTGLG LAIVKKIIED HGGQLELHDA
PSDFDGGAGA MIRVILPPAG ETGGEHNLKD KGNFNGG
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