Gene Smed_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1061 
Symbol 
ID5321907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1128489 
End bp1128965 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID640790004 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001326749 
Protein GI150396282 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.600163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG TAACAATTGC AGAGGAGCCG CCGCGCCAGC TGGCCGTTCT CCGCCTGCTT 
GAAATGTCCG ATGCCTATGC GTCATCGCTC TATCCCGCCG AAAGCAACCA CCTGGTCGAT
CTCTCTCAAC TGGAACTGTC GACCGTATCT TTTTTCGTTG CCCGGCGTGA CGACCACATC
GTCGGCTGCT GCGCCCTCGT CGAAGCTGGC GACGGCACGG CGGAAATCAA GCGGATGTTC
GTGGACCCGG AGGCGAGGGG ATTGAAAGCC GGCAGGCTGC TTCTCTCCGC GCTGGAGGGG
AAGGCGGAAA AGCTTGGCCT CACGGCGATC CGCCTCGAGA CCGGCATCTA CCAGCCGGAG
GCGATCGGTT TGTACAAGGC ATCCGGATAT GTCGAGAGGG CGCCGTTCGG CAGCTATCAA
CCGGACCCGC TCAGTCTGTT CATGGAGAAG CGGGTGGCGC AGACGGTTCG AAGTTGA
 
Protein sequence
MPTVTIAEEP PRQLAVLRLL EMSDAYASSL YPAESNHLVD LSQLELSTVS FFVARRDDHI 
VGCCALVEAG DGTAEIKRMF VDPEARGLKA GRLLLSALEG KAEKLGLTAI RLETGIYQPE
AIGLYKASGY VERAPFGSYQ PDPLSLFMEK RVAQTVRS