| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1046 |
|---|
| Symbol | |
|---|
| ID | 5321892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1116345 |
|---|
| End bp | 1116773 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640789989 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_001326734 |
|---|
| Protein GI | 150396267 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.460697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTGA AAGCGATTCT CAACGAAAAA GGTCACGACG TCATCACGGT TACGGAACAG
GTGACGGTTC AACAGGCCGC GACTTTGCTG CATGAAAATC ATATTGGTGC CGTTGTCGTC
GTCGATCCCG AGGACCAGAT CGTCGGCATC ATGACGGAGC GCGATATCGT TGCCTCGATT
GCCAGATATG GCGCGAGCTG TCTCGATAAG CCGGTTTCGT CCGTCATGTG GCAGAACGTC
TATTGCTGCC GCGAGGAGAT GTCGGTCGAC ACCCTGATGG AGATGATGAG CAAACTTCGT
GCGCGTCATC TTCCTGTGGA GCGGGAGGGC CGCTTGGCAG GCATTATCTC GATCGGAGAC
GTGGTCAAGT ATCACATACG GGCGATCGAG AACGAGGCCG AACAGATCAA GGCCTATATC
TCCGGTTGA
|
|---|
| Protein sequence | MSVKAILNEK GHDVITVTEQ VTVQQAATLL HENHIGAVVV VDPEDQIVGI MTERDIVASI
ARYGASCLDK PVSSVMWQNV YCCREEMSVD TLMEMMSKLR ARHLPVEREG RLAGIISIGD
VVKYHIRAIE NEAEQIKAYI SG
|
|---|
| |