| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1040 |
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| Symbol | |
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| ID | 5321886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1109818 |
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| End bp | 1111302 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789983 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001326728 |
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| Protein GI | 150396261 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.183484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGA AGAGCAATAC AGTGTCTCAA TCCGTTATTC CCAGTCTCGC GAAACGCCCG
TATGGCGCCA TTTCAGAAGT TGTCGGGCGG ATTTTCCTCG CCGGCCTGAT TGTCGTGCTG
ACCCTTTCAG CGCCCGCTCT CGCCAATTCG AAATATGCCG GCATCGTAGT TGACGCGAAG
ACCGGCAAGG TTCTCTACGG CGAAGACGCG GATCAATTGC GCTACCCCGC CTCGCTTACG
AAGATGATGA CGCTGTATCT GACATTCGAG GCGCTTGAAG CGGGTCGGAT CAACAAGAGC
ACGCCCGTAC CATTTTCAAA GAAAGCTTCG GCGGAGCCGC CGTCGAAGCT CGGGGTACGC
GCCGGCCGGT CGATCACCGT CGAACAGGCT ATTCTCTCTC TGGTGACGCG CTCGGCCAAC
GATTCGGCAA CTGCCCTTGC TGAACTCCTC GGCGGCTCGG AACAGCGCTT CGCCCGGATG
ATGACCAACA AGGCCCGCGC GTTGGGAATG ACGCGCACGA CTTATCGCAA CGCCCACGGC
CTGCCCAATT CCGAACAGCG CACGACTGCA CGCGACCAGG CCCGCCTCGG CATCGCATTG
CGGCAGCACT TCCCGCAGTA TTACGATTAT TTCTCGACGC GAAGCTTCCG TTTCGGCAAG
CAGACGATCG GCAATCATAA CCGGCTCCTT GGTAATGTCC GGGGAGTGGA CGGCATCAAG
ACCGGGTATA CGCGCGCTTC CGGGTTCAAT CTGGTGACCT CCGCCCAACT CGGCGGACGC
AGCATCGTCG CGGTTGTCAT GGGCGGCACC TCCGGCGGTT CGCGCGACGC CCAGATGCGC
AAGCTGGTAG CCAAGTACAT GCCCGCCGCA TCGCGCCGCG GCGGCGGCAA CCTTATCGCC
CAGGCTCCCG CCGAGCCTGT AGCAGTGGTC GCCGAAGCGG ACGTGCGGCC GGCCACGACG
GCTGTTGCTT CGGCCGCCGC CGCCCTGCCG AATAAGGGCC CTGTCCCGGA TTTCCGGTAC
GATAGCGAAA GCGCAGGCGG AGTTGAAATG GCCTATGCAT CGACGAAGCG CGCTTCGGAC
AATCCCGTGC TCGCACCGAA CACGCTCGAC GCGCAGAGCG CCAGACTCGG CCGGGAACCG
GAATCCGGCG GCGTCGACTC GCAGATCACC AACTCGGTCG CAACGGCGGA AACGGCACCG
GCCATGGCTG AAGCCCACAC CGAAGCGAAT ATCGAACTGC AAGGCTGGGT GATCCAGATC
GGCGCCACGC CTGACAAGAC GCAGGCCATG ACGCTGCTCG ACAATGCCAA GGAAAAGGGT
GGAAAGGCGC TGCGTAACGC CACCCCCTTC ACGGTCGCGT TCAGCAGTGG CGGCGCTCAG
CTCTACCGCG CCCGTTTCGG CGGATTCGAT GATCAGGACA AGGCTGTCAA CGCATGCAAG
GCATTGAAGA AGAAAGGCTT CGCCTGCTGG GCAAGCCAGC AGTAA
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| Protein sequence | MTMKSNTVSQ SVIPSLAKRP YGAISEVVGR IFLAGLIVVL TLSAPALANS KYAGIVVDAK
TGKVLYGEDA DQLRYPASLT KMMTLYLTFE ALEAGRINKS TPVPFSKKAS AEPPSKLGVR
AGRSITVEQA ILSLVTRSAN DSATALAELL GGSEQRFARM MTNKARALGM TRTTYRNAHG
LPNSEQRTTA RDQARLGIAL RQHFPQYYDY FSTRSFRFGK QTIGNHNRLL GNVRGVDGIK
TGYTRASGFN LVTSAQLGGR SIVAVVMGGT SGGSRDAQMR KLVAKYMPAA SRRGGGNLIA
QAPAEPVAVV AEADVRPATT AVASAAAALP NKGPVPDFRY DSESAGGVEM AYASTKRASD
NPVLAPNTLD AQSARLGREP ESGGVDSQIT NSVATAETAP AMAEAHTEAN IELQGWVIQI
GATPDKTQAM TLLDNAKEKG GKALRNATPF TVAFSSGGAQ LYRARFGGFD DQDKAVNACK
ALKKKGFACW ASQQ
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