Gene Smed_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1034 
Symbol 
ID5321880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1104457 
End bp1104843 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID640789977 
ProductMerR family transcriptional regulator 
Protein accessionYP_001326722 
Protein GI150396255 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0151455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAGT ATTATAGCAT TACCGAGCTG ACCCGGGAAT TCGGCATCTC AACTCGAACG 
CTGCGTTTCT ATGAGGATGA AGGACTGATT CATCCGGAGC GCCGTGGGCG CACGCGTCTC
TTCCGTCCCG CCGACCGTCA CCTCATAAAA GAGATACTGC GCGGCCGGCG CATTGGCTTC
ACTATCGCCG AGATTCGCGA GATTATTCAA GTCTATAAGG ACCCGCCTGG CGAGATGGGT
CAGCTGCAGC TCCTCATGAA GCGCGTTGAG GAGAAGCGCG AGGACTTGCG ACAGAAGCGC
AAGGACATCG AAGACACCCT CACCGAACTC GACAATGTCG AGGAGGCCTG CCTGACGCGT
CTTGCGGAAA TCGGTGTCGG CACCTGA
 
Protein sequence
MNKYYSITEL TREFGISTRT LRFYEDEGLI HPERRGRTRL FRPADRHLIK EILRGRRIGF 
TIAEIREIIQ VYKDPPGEMG QLQLLMKRVE EKREDLRQKR KDIEDTLTEL DNVEEACLTR
LAEIGVGT