Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1022 |
Symbol | |
ID | 5321867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1091628 |
End bp | 1092287 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789964 |
Product | hypothetical protein |
Protein accession | YP_001326710 |
Protein GI | 150396243 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGGA AGGCAGGCCT GCGGCACTGG CCGTTCTACC TAGCCCTTAC AGGTGGGTTG CTCGGTCTGC CGATCGGTTT TGCGCTGTTT CGCGCAGAGG CGATCGAGGT GGCGGCGATA CTGTTCTTCC TTATTTATCT GTCGATCAAC GCACTGCGAC TTCCCAAGCT TACAGGCAGC TATCTCCAAA CTCATGCGCG CGAGACGGGA GAGCCGGAGC CGATCATCTT TCTCGTGACG CTCGGAGCCG CGGCGATCTC TCTCGTAGCT CTGTTCCTCG CGCTCAACCG CACTGGCGAT GGCGGTGCGG TTGAGCTCTC GATCGCTTTC ACCGCCGTCG CGCTCGGCTG GGCGACAGTC CACACCATGG CAGGGCTGCA CTATGCTCAC CTCTATTGGA TTGCGCGCCA TCACGAGCCA GACAGCGATC GCCCCGCTCG AGGTCTCGCC TTTCCGGAAA CCGACAGCCC CGGCGGATAC GATTTTCTCT ATTTCGCTTT CGTCATTGGA ATGACAGCGC AGACTTCCGA CGTCGCCATC ACGACGACGG CAATGCGGCG TGTCAACCTG GTGCACGCGA TCGTCTCGTT CTTCTTCAAC ACGGTGCTGC TTGCCGCCGC CGTCAATGCC GCGGTTCAGC TTGCCGGCGG CGCCCCATGA
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Protein sequence | MDGKAGLRHW PFYLALTGGL LGLPIGFALF RAEAIEVAAI LFFLIYLSIN ALRLPKLTGS YLQTHARETG EPEPIIFLVT LGAAAISLVA LFLALNRTGD GGAVELSIAF TAVALGWATV HTMAGLHYAH LYWIARHHEP DSDRPARGLA FPETDSPGGY DFLYFAFVIG MTAQTSDVAI TTTAMRRVNL VHAIVSFFFN TVLLAAAVNA AVQLAGGAP
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