Gene Smed_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0997 
SymbolrplX 
ID5321842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1073682 
End bp1073993 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content59% 
IMG OID640789939 
Product50S ribosomal protein L24 
Protein accessionYP_001326685 
Protein GI150396218 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0287179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGA TTCGCAAAGG CGACAAGGTC GTCGTTCTGA CCGGTAAGGA CAAGGGCCGC 
ACCGGCGAAG TCATTCAGGT CATGCCGAAG GAAGATCGGG CTGTCGTGCG CGGCGTGAAC
GTCGTGAAGC GTCACCAGCG CCAGACCCAG AACCAGGAAG CCGGCATTAT CACCAAGGAA
GCCCCGATCC ACCTTTCGAA CATCGCGATT GCCGATCCGA AGGACGGCAA GCCGACCCGA
GTCGGTTTCA AGATCGACGG TGACAAGAAG GTCCGCGTGG CCAAGCGTTC GGGAGATGTG
ATCGATGGCT AA
 
Protein sequence
MQKIRKGDKV VVLTGKDKGR TGEVIQVMPK EDRAVVRGVN VVKRHQRQTQ NQEAGIITKE 
APIHLSNIAI ADPKDGKPTR VGFKIDGDKK VRVAKRSGDV IDG