| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0965 |
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| Symbol | |
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| ID | 5321807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1042863 |
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| End bp | 1043807 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789904 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001326653 |
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| Protein GI | 150396186 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.292002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0128926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACC TGAACGACAT CGCGCTTTTC GCTGCGGTCG TCAAGAACAA TGGTTTCAGC
GCCGCTGCGC GCGATCTGAA CGTGCCGAAA TCCAAGCTCA GCAAGCATGT CGCGCGCCTT
GAGGAGCAAT TGGGTGTTCG CCTGCTCGAG CGTTCGACCC GCAAGCTTAG GATGACCGAA
ATCGGCCGGA TCTTCTACGA ACACGCTCAG GGGCTGCTCG ACGGCGTGGC CGCAGCCGAA
GCCGAGATCG CGGCCGTTCG CGCCGAGCCG ACCGGCGTCG TCCGGCTGGC CTGCCCGATC
GGCTTCACGC CGATGCTCGC CGATATCCTG CCCGCCTTCC ACCGCAGATA TCCGGGCGTC
CGGCTTTTGA TCACAGCCAC CAATCGGCGC ATCGATCTGA TCGAGGAACG GATAGACGTC
GCCCTGCGCG CACGCGACCA GCTCGACACG GACAATCAGC TGATCGTGCG AAAGTTCGGG
GAAGTGCGCC AGCGACTCGC CGCCAGTCCG ACGCTTCTCG CACGCCTCGG CGAAATCACC
ACCGATAAAC TGTCGCAAAT GCCGACGCTG TCGATGAACG AGCAGAACCC CAATGACATT
TGGCGCCTCG TGCACGCAAC CGGGGGAACG ATCGAGATCG CTCACCGGCC AGTCATAGGC
TGCAGCGATT TTCTCATCCT GGAGCGCGCT GCCATCGAAG GTATGGGGAT AGCCCTGCTC
CCCGACCATA TCTGCGAGCG GGCCTTCCGT AGCGGCGCCC TCGTTCCGGT CCTGCCGGAG
TGGACCTCCG GCAATGTCAT GGTCCACCTG GTCTTTCCCT CGCGCCACGG GCTGCTGCCC
GCGACCCGCG CCCTGATCGA CTATCTGGCG GAAAACCTGA TCAAGGCGCT GGAGCGGTGC
CGCGAGGTGG AGCCGCCGCG GCCGGCGGCA TCGTTCGAGA TCTGA
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| Protein sequence | MQDLNDIALF AAVVKNNGFS AAARDLNVPK SKLSKHVARL EEQLGVRLLE RSTRKLRMTE
IGRIFYEHAQ GLLDGVAAAE AEIAAVRAEP TGVVRLACPI GFTPMLADIL PAFHRRYPGV
RLLITATNRR IDLIEERIDV ALRARDQLDT DNQLIVRKFG EVRQRLAASP TLLARLGEIT
TDKLSQMPTL SMNEQNPNDI WRLVHATGGT IEIAHRPVIG CSDFLILERA AIEGMGIALL
PDHICERAFR SGALVPVLPE WTSGNVMVHL VFPSRHGLLP ATRALIDYLA ENLIKALERC
REVEPPRPAA SFEI
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