| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0959 |
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| Symbol | |
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| ID | 5321800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1034795 |
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| End bp | 1036045 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789897 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001326647 |
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| Protein GI | 150396180 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0256681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGTT CGGCAAATCA GCTGTATTCC ATGCGGATGA TCGCCCGCCA TTGCGGTTTG
CGCAGGCTGG TCGCTGCCGT TTTGTTTCTC CTGCTGCCGG TCGTGGGCGT GCACGCCGGC
GAGCCGGTGC CTCTCCTTGC CTACGCGGCG CGGATCGCCG GCGATGATGC CCGCACGCGG
CTGGTGATCG AGTTCGATCG CGAACCGGTC TTTTCGGTCC ACTACGTAGC CAATCCCGTC
CGCATCATCG TGGACCTGCC GGAAACCTCC TTCGGGCTTA AGCCCGAGAG CCTGGAGCCC
CGCGGGCTGT TCGACGCCAT CCGCTATGGA GGAATGGGCG CAGGGGCCTC ACGGCTTGTG
CTCTCCGCCA AGGAGCCGAC GGAATTGACT CATGCGGAAG TGAAGCCGAT GGAGGATGGA
AAGGGATTTC GCCTCGTGCT CGACGCCGAG AGGATAGGCC AGGACCGCTT CGACAAGATC
CTCGCAGAGC AGAAGTGGAC GGGCACGGTG CGCGCCGTCA AAACCGACAG GCCGGCCGCA
GCACCCGCCA AGGCTGATGC TTTCGTGATT GCCATAGACG CCGGCCATGG CGGCATCGAT
ACCGGCGCAA TCGGCAGCGT CACGAAAACC GAAGAGAAAC ACGTCACACT GGCCTTCGCA
AAAGAACTGG TGGAAACGCT CAATCGAGAG CCTGGCATCG AAGCGTTCCT GACGCGGGAA
CGCGACGAGT TTCTTTCCTT GCCTCAACGC GTGCAGATCG CGCGTCAGCG AGGATCCAGC
CTGTTCATTT CCCTGCATGC CGACACTTTG AAGCAAAGGG ACATTCGAGG TGCAACGGTC
TACACGATTT CCGACAAGGC GTCCGATCAC CTTGCCGCCG ATCTCGCCGC GCGCGAAAAC
CTGTCCGACG AGATCGCCGG GATACCGCTT GAAAGCGAAC CGGCCGAAGT CGCCGACATC
CTCATCGATC TCACCCGTCG CGAAACGCAG GCCTTTTCGG TCAATCTCGC GCGAAGCGTC
ATCGCTTCGT TCGAAGGGCA GATCAAGCTG ATCAACAACC CGCACCGCCA TGCGGGATTT
CGGGTCCTGC AGGCACCGGA CGTGCCCTCG GTGCTGCTCG AGCTCGGCTT CATGTCCAAC
AAGGAAGATG AGAAGCAACT GCTCGATCCG GAATGGCGAA AGAAGGTGTC CGCGCTGCTT
GCCGCCGCCG TACAGAGCTA TCGAAACACC GCGGTTGCAA ACGGCGGTTG A
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| Protein sequence | MKRSANQLYS MRMIARHCGL RRLVAAVLFL LLPVVGVHAG EPVPLLAYAA RIAGDDARTR
LVIEFDREPV FSVHYVANPV RIIVDLPETS FGLKPESLEP RGLFDAIRYG GMGAGASRLV
LSAKEPTELT HAEVKPMEDG KGFRLVLDAE RIGQDRFDKI LAEQKWTGTV RAVKTDRPAA
APAKADAFVI AIDAGHGGID TGAIGSVTKT EEKHVTLAFA KELVETLNRE PGIEAFLTRE
RDEFLSLPQR VQIARQRGSS LFISLHADTL KQRDIRGATV YTISDKASDH LAADLAAREN
LSDEIAGIPL ESEPAEVADI LIDLTRRETQ AFSVNLARSV IASFEGQIKL INNPHRHAGF
RVLQAPDVPS VLLELGFMSN KEDEKQLLDP EWRKKVSALL AAAVQSYRNT AVANGG
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