| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0957 |
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| Symbol | |
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| ID | 5321798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1031233 |
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| End bp | 1034067 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789895 |
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| Product | ribonuclease |
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| Protein accession | YP_001326645 |
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| Protein GI | 150396178 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.545354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0139882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA AAATGCTTAT CGATGCGTCT CACTCAGAGG AGACGCGCGT CGTTGTCGTA
CGCGGAAACC GCATAGAAGA ATTCGATTTC GAATCGGAAC ATAAAAAGCA GATCCGCGGC
AATATTTACC TGGCCAAGGT AACAAGAGTG GAGCCGTCGC TCCAGGCAGC TTTCGTCGAC
TACGGCGGCA ATCGCCACGG ATTTCTGGCC TTCGCCGAGA TCCATCCCGA CTATTATCAG
ATCCCCCTCG CCGATCGTCA GGCCCTGTTG AAAGCGGAAG CGGAAGAAGC GCGCCGCGAA
GACGACATCG AGCCGATGGA GACCTCGGCC GAACGGAAAT CTGCGTCTTC TACCGATTCG
GTGGCCGAAG TGGTGGCACA GGCCGAAGCC GCCGAGGCGG CCGGAGAGGC CGCTGAGGCG
CAAGCCGCTG CGGAGAAGCC CAAGGCCAAG GCCAAGCCGA AGCGTACACG CCGTGCGAAG
CCGAAGGCAA GCGAGGAGAC CGCGGCGAGC CAGGAGTCGG AGGCGCCTGA AGGTGGCCCG
TCTGAAGACG GCGAAAGCGA CAAGAGCGAA ATGGCCGCGA TCGTCGAAAC CGACTCGATC
TCCGAGGATG TCGACGCGCG CCGCCAGCGC GACGACGACG ATGACGACGA CAATCACGAC
GGCGAAAAGG AAATCATCGA ATCCGTCGGC GCCGAAGACG CCATGGAAGA GGTGGCGGAG
CGCCAGTTCC GCAAACCGCG CAAGCAGTAC CGGATTCAGG AAGTGATCAA GCGTCGGCAG
ATCCTGCTGG TGCAGGTCGC GAAAGAAGAA CGCGGCAACA AGGGTGCGGC ACTCACGACC
TATCTTTCGC TCGCCGGCCG CTACTCCGTG CTCATGCCGA ACACGGCGCG CGGTGGCGGC
ATCTCTCGCA AGATCACCAA CCTGCAGGAC CGCAAGCGCC TGAAGGAGAT CGCCCGCGGC
CTCGACGTGC CGCAGGGCAT GGGTGTGATC CTGCGCACCG CCGGAGCCAA TCGCACCAAA
GTCGAGATCA AGCGTGATTT CGAATATCTC ATGCGTCTGT GGGAGAACGT CCGGACGCTG
ACCCTGAACT CGACGGCCCC CTGCCTTGTT TACGAGGAGG GCAGCCTGAT CAAGCGATCG
ATCCGCGACC TCTACAACAA GGACATAAGC GAAATCGTCG TCTCGGGCGA GGAAGGCTAC
AAGGAAGCCA AGGGCTTCAT GAAGATGCTG ATGCCCAGCC ACGCGAAGGT CGTGCAGCCC
TATCGCGACG TTCACCCGAT CTTCTCGCGC TCCGGCATCG AAGCGCAACT CGACCGCATG
CTGCAGCCGC AGGTGACGTT GAAGTCGGGC GGCTACATCA TCATCAATCA GACCGAAGCG
CTGGTTTCCA TCGACGTGAA CTCCGGTCGT TCGACGCGGG AGCATTCGAT CGAGGACACT
GCTCTCCAGA CGAACCTCGA GGCAGCCGAG GAAGTAGCGC GGCAATTGCG CCTGCGCGAC
CTCGCCGGCC TCATCGTGAT CGACTTCATC GACATGGAAG AGAAGCGGAA CAACCGCTCG
GTCGAGAAGA AGCTCAAGGA TTGCCTCAAG AACGATCGCG CCCGCATCCA GGTCGGCCGG
ATCTCGCATT TCGGCCTGCT CGAAATGTCT CGCCAGCGAA TCCGTGCCTC GGTGCTGGAA
AGCACGATGC AAACCTGCCC GCACTGCAAC GGCACGGGCC ACATTCGTTC GCAATCCTCT
GTCGCTTTGC ATGTGCTGCG CGGCATCGAG GAACACCTGC TCAAGAACAC CACGCATGAC
ATCAGCGTAA GAACGACCCC CGACATCGCG CTCTATCTGC TCAATCAGAA ACGCAGCTCG
ATTACGGACT ATGAACAGCG CTTCGGTGTT TCAATCTTCA TTGAAGCGGA CGCCCATGTC
GGCGCCCAAC ACTTCGCGAT CGATCGCGGT GAACCGGTCG AAAATCCGGT CAGGATCGAC
CAGATTCTGC AGTTCGAGCC GGAACCGGAG GAAGAAGAAG AAGAAGAAGA GGTCCTGATC
GAAGAAGAAC TCGACGACGA GGAAGCGGAA GAGACCGCTG CCGAGCATCA GGACCAACAG
AAGGGGCAGC CCGACGATCA GGGCGGCCGC AAGCGCAAGC GCCGCCGCCG CCGGCGCGGC
AAGGGCGCGG GTCAGGGAGC GGACGCAGTT TCCGCAGAGT CTGCCGATGC GGCTGAAGAC
GAGGCCGGCG ACGAGGCCGC CGCGGACGAC GCCGAGGATG AACTCGACGC TGCGGACTCC
CTGAATGGCG ATAGTGAGCA GAAGCGCAAG CGTCGCCGGC GTGGCAAGCG CGGCGGACGC
CGCAATCGTC AGGAAGAACT GGCTGGTTCC GAAGGCGAAA CCGGCGCGAC GGCAGAAACC
GTCGAAGAGC CTGGTGAAGA GTCCGTCGAC AGTACTGCAG CAGAGATTCC AGCAGTCTCT
GCGGCTGAGG AAGCGCCGGC CGACGTCGCT GCTGCTGCCG CCGTCGAGGG AGTGGCCGAA
GAGCCGAAGC CGGCCAAACC GCGCCGCAGC CGTAAGAAAA CGACCAAGAC CGAGGAACCG
GCGGTGAATG CCGACGAGGT CGCCGAAAAG GTGGTCGAGG CTCAGCCGGA ACCCGCAGAG
CCTGCGCCTC AAATAGTCGA GGAAGCAGTC GAGGAAGCGG TCGAGGACCT CGAAGGCGCC
AAGCCCGCGC GCTCAAATCG AGACCTGTCG GCGATCGCAT CCAAGCCGGT CGTGACGTCC
AGCAAAGGCG AGAGCGAAGA AGAGCCGACA AAGCCCAAAA AGGGCGGCTG GTGGCAGCGC
CGCGGTTTCT TCTGA
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| Protein sequence | MAEKMLIDAS HSEETRVVVV RGNRIEEFDF ESEHKKQIRG NIYLAKVTRV EPSLQAAFVD
YGGNRHGFLA FAEIHPDYYQ IPLADRQALL KAEAEEARRE DDIEPMETSA ERKSASSTDS
VAEVVAQAEA AEAAGEAAEA QAAAEKPKAK AKPKRTRRAK PKASEETAAS QESEAPEGGP
SEDGESDKSE MAAIVETDSI SEDVDARRQR DDDDDDDNHD GEKEIIESVG AEDAMEEVAE
RQFRKPRKQY RIQEVIKRRQ ILLVQVAKEE RGNKGAALTT YLSLAGRYSV LMPNTARGGG
ISRKITNLQD RKRLKEIARG LDVPQGMGVI LRTAGANRTK VEIKRDFEYL MRLWENVRTL
TLNSTAPCLV YEEGSLIKRS IRDLYNKDIS EIVVSGEEGY KEAKGFMKML MPSHAKVVQP
YRDVHPIFSR SGIEAQLDRM LQPQVTLKSG GYIIINQTEA LVSIDVNSGR STREHSIEDT
ALQTNLEAAE EVARQLRLRD LAGLIVIDFI DMEEKRNNRS VEKKLKDCLK NDRARIQVGR
ISHFGLLEMS RQRIRASVLE STMQTCPHCN GTGHIRSQSS VALHVLRGIE EHLLKNTTHD
ISVRTTPDIA LYLLNQKRSS ITDYEQRFGV SIFIEADAHV GAQHFAIDRG EPVENPVRID
QILQFEPEPE EEEEEEEVLI EEELDDEEAE ETAAEHQDQQ KGQPDDQGGR KRKRRRRRRG
KGAGQGADAV SAESADAAED EAGDEAAADD AEDELDAADS LNGDSEQKRK RRRRGKRGGR
RNRQEELAGS EGETGATAET VEEPGEESVD STAAEIPAVS AAEEAPADVA AAAAVEGVAE
EPKPAKPRRS RKKTTKTEEP AVNADEVAEK VVEAQPEPAE PAPQIVEEAV EEAVEDLEGA
KPARSNRDLS AIASKPVVTS SKGESEEEPT KPKKGGWWQR RGFF
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