| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0946 |
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| Symbol | gatB |
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| ID | 5321787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1022099 |
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| End bp | 1023601 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789886 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001326636 |
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| Protein GI | 150396169 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.209808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.195446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG TCGACGTCCG CACTCCTGAT CCGAAACGCT TCATTCCGGG CGCCACCGGC
GACTGGGAGG TCATCATCGG CATGGAAGTC CATGCGCAGG TGCTGAGCAA TTCGAAGCTG
TTCTCCGGTG CATCGACCGA GTTCGGGTCC GAGCCGAACG CCAACGTTTC GCTTGTCGAT
GCTGCAATGC CCGGCATGCT TCCGGTGATC AATGAGGAAT GCGTCAAGCA GGCCGTGCGC
ACGGGCCTCG GCTTGAAGGC AAAGATCAAC AATCGTTCGA TCTTCGATCG GAAGAACTAC
TTCTATCCGG ACCTGCCACA GGGCTACCAG ATCTCGCAAT ACAAGGACCC GATTGTCGGA
GAAGGCAAGA TCATCATCTC CGTCGGACCG GACCGCCAGG GCCATTTCGA AGATGTGGAG
ATCGGCATCG AGCGTCTGCA TCTGGAGCAG GATGCCGGCA AGTCGATGCA CGACCAGCAT
CCAGCCATGT CCTATGTCGA TCTCAACCGC TCGGGTGTTG CGCTGATGGA GATCGTCTCG
AAGCCGGATC TGCGTTCGTC GGACGAGGCG AAGGCCTATC TCACGAAGCT TCGCTCGATC
CTGCGCTATC TCGGCACCTG CGACGGCAAT ATGGACGAGG GCTCGATGCG CGCGGACGTC
AACGTCTCCG TTCGCCGCCC CGGCGAAGCA TTCGGCACGC GCTGTGAAAT CAAGAACGTC
AACTCGATCC GCTTCGTCGG TCAGGCGATC GAATACGAGG CCCGTCGCCA GATCGCCATC
CTTGAAGACG GTGGGGCAAT CGATCAGGAA ACGCGTCTCT TCGACCCGGG CAAGGGCGAG
ACGCGTTCCA TGCGGTCGAA GGAAGATGCG CACGACTACC GCTACTTCCC CGACCCGGAT
CTGCTGCCGC TCGAATTCGA CGATGCGTTC GTAGAGGCGC TGAAGGCACA CCTGCCGGAG
TTGCCGGACG ACAAGAAGGA GCGCTTCGTC AGAGATCTCG GCCTGTCCGT CTACGACGCG
TCCGTTCTCG TGTCGGAAAA GGCGATCGCC GACTACTTCG AGGCCGTGGC AGCTGGTCGC
GACGGCAAGA CCGCGGCGAA CTGGGTCATC AACGACCTTC TCGGCGCGCT GAACAAGGCT
GGAAAGCCTA TTGAGGGAAC GCCCGTCTCG CCGGCACAGC TTGGTGGCAT CATCGATCTC
ATCAAGGATG GGACCATCTC CGGCAAGCTT GCGAAGGACC TCTTCGAAAT AGTCTGGAAC
GAGGGCGGCG ATCCGGCGCA GATTGTCGAG AGCCGTGGTA TGAAGCAGGT AACCGATACC
GGTGCGATCG AGAAGGCCGT CGACGAGATC ATCGCAGCCA ACCCCGACCA GGTGGAAAAG
GCGAAGGCGA AGCCCTCGCT TGCCGGCTGG TTTGTAGGGC AGGTGATGAA GGCGACCGGC
GGCAAGGCCA ACCCGCAGGC GGTGCAGGCG CTCGTAAAGT CCAAGCTCGG ATTCGAGGAA
TGA
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| Protein sequence | MSIVDVRTPD PKRFIPGATG DWEVIIGMEV HAQVLSNSKL FSGASTEFGS EPNANVSLVD
AAMPGMLPVI NEECVKQAVR TGLGLKAKIN NRSIFDRKNY FYPDLPQGYQ ISQYKDPIVG
EGKIIISVGP DRQGHFEDVE IGIERLHLEQ DAGKSMHDQH PAMSYVDLNR SGVALMEIVS
KPDLRSSDEA KAYLTKLRSI LRYLGTCDGN MDEGSMRADV NVSVRRPGEA FGTRCEIKNV
NSIRFVGQAI EYEARRQIAI LEDGGAIDQE TRLFDPGKGE TRSMRSKEDA HDYRYFPDPD
LLPLEFDDAF VEALKAHLPE LPDDKKERFV RDLGLSVYDA SVLVSEKAIA DYFEAVAAGR
DGKTAANWVI NDLLGALNKA GKPIEGTPVS PAQLGGIIDL IKDGTISGKL AKDLFEIVWN
EGGDPAQIVE SRGMKQVTDT GAIEKAVDEI IAANPDQVEK AKAKPSLAGW FVGQVMKATG
GKANPQAVQA LVKSKLGFEE
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