| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0937 |
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| Symbol | |
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| ID | 5321778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1014994 |
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| End bp | 1016646 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789877 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001326627 |
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| Protein GI | 150396160 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0783205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.320955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA TGAACCGGAC CGAGCAGAAA CTTGCAGAAC TGAACCAGCC TAAGCCCTGG
TCCGGTGTCA ATGCCTTTCG CTCCGACCCG CTGGTGGTCG ACATCACCTC CAGTATGCCG
AAGTCGCTAC GCGACGAGTT CGATGGACTT GGGCGTTACG TGACTTCGCC CGAGGCACAG
GAATTGGCCC GTATGGCCAA TGAAGGGGTG CCGAAACTGA AGACGCACGG GCCCCGCGGC
GAGCGCCTCG ACGTCGTCGA GTTCCATCCC GCCTGGCATG CGCTGATGCG CCGCTCCATG
ACGACGGGGC TGCATTCCTC AGCCTGGGAG AACCTGCCCG ATGAGCGCGG CCGTTCGCAC
AAGGTTCGGG CAATCCGCTT CTACCTGACG GCGCAGCTCG AATGTGGCCA TCTATGCCCG
CTGACGATGA CCAGCGCATC GGTCGCGGCG ATCACGTCAT CGCCCGCCGT CCAGAAGGAA
TGGGCGCCGA AGATCCTCTC GCGCAAATAT GATTCGACCA ACCGGCCGTG GATGCAGAAA
TCCGCCGTCA CGATCGGCAT GGGCATGACC GAGAAGCAGG GCGGCACGGA CGTGCGCGCC
AATACCTCCA CGGCCGAACG CGTGGGCGAG GGCATTTATC GCCTCACGGG ACACAAATGG
TTCATGTCCG CGCCGATGAG TGATGCCTTC GTCATGCTGG CGCAGACCCG GGAGGGGCTC
GGCTGCTTCC TGGTCCCGCG GCTGCTGGAG GACGGAGGGG CGAACGGCCT GCGTTTTCAG
CGCCTGAAAG ACAAGCTCGG CAACCGGTCG AATGCATCCT CCGAGGTCGA GTTTTCGGAT
ACTTTCGGCT TCCTGCTCGG AGCGCCGGAT GCCGGCATTC GCACGATCCT CGATATGGTG
ACGCTGACCC GGCTCGATTG TGCGCTCGCC TCGGCCGGTA TGATGCGCGC GTCGCTCGCC
GAAGCGGTGC ATCATACACG CGGTCGCAAG GTCTTCGGCA AGGCGCTTGT CAGCCAGCCC
ATGATGACCA GGGTGCTTGC CGACATGGCT CTGGATGTCG CAGCTGCAAG CGCGCTGTCG
TTCCGGCTTG CCGAAGCTTT CGACAATGCC CATAGCAGCG CGGAGGATGC TGCCTACGCC
CGTATCATGA CGCCGGTTGC GAAATACTGG TGCTGCAAGA TCGCCCCCGC GCTGATCTAC
GAGGCCATGG AGTGCATGGG CGGCAATGGC TATGTCGAGG AGCGGGCGCT TGCCCGCCAC
TACCGCGAAG CGCCGGTCAA TGCGATATGG GAAGGGTCCG GCAACGTCAT GGCGCTCGAT
GTCCTGCGGG TACTTTCGCG ACGGAAGGAA CTGTTCGAGC AGCTCTTCGC AACGATCGGC
CGCGATCTCG GTCCCGCCGG GCGAAAGACG ATTGAAGTTC TGCGTGCCGC CATGTCGCTC
TGCGAGCGTG ACGAAGGCGC CGCGCGGATG CTGGTCGAGC AACTTGCGCT GGCCGCGGCT
GCCGCCGAGC TCTACAGGCT CGGGGCGGGG CGCATCGCCG ATGCGTTCCT GGAATCCCGC
CTCGCCGCGG GCTGGCGCTC GACTTACGGC ATGCTCGATT CGCGTTTCGA TTCGGCCTAC
GTCCTCGATT TGCTTTATCC GGCCGCAACA TAG
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| Protein sequence | MNQMNRTEQK LAELNQPKPW SGVNAFRSDP LVVDITSSMP KSLRDEFDGL GRYVTSPEAQ
ELARMANEGV PKLKTHGPRG ERLDVVEFHP AWHALMRRSM TTGLHSSAWE NLPDERGRSH
KVRAIRFYLT AQLECGHLCP LTMTSASVAA ITSSPAVQKE WAPKILSRKY DSTNRPWMQK
SAVTIGMGMT EKQGGTDVRA NTSTAERVGE GIYRLTGHKW FMSAPMSDAF VMLAQTREGL
GCFLVPRLLE DGGANGLRFQ RLKDKLGNRS NASSEVEFSD TFGFLLGAPD AGIRTILDMV
TLTRLDCALA SAGMMRASLA EAVHHTRGRK VFGKALVSQP MMTRVLADMA LDVAAASALS
FRLAEAFDNA HSSAEDAAYA RIMTPVAKYW CCKIAPALIY EAMECMGGNG YVEERALARH
YREAPVNAIW EGSGNVMALD VLRVLSRRKE LFEQLFATIG RDLGPAGRKT IEVLRAAMSL
CERDEGAARM LVEQLALAAA AAELYRLGAG RIADAFLESR LAAGWRSTYG MLDSRFDSAY
VLDLLYPAAT
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