Gene Smed_0910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0910 
Symbol 
ID5321751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp981897 
End bp983138 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content64% 
IMG OID640789850 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001326600 
Protein GI150396133 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.186755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCACG ACGGAATCGT CATTGTCGGG TCAGGTCATG CGGGTGCGCG TGCTGCCCAG 
TCGCTTCGCG CCAATGGCTG GCAACACCGC ATCAGCGTGA TCGATGGCGA GGGCTGTGCT
CCCTATGAAC GCCCGCCCCT ATCCAAGGCA GTTCTCAGCG GGAAATCCAG GCCGGAAGAT
GCCGTGCTGT TCCCCCAGGA CTTCGTCGAG CAACATGGCA TCGACTTCCG CTCCGGCGTC
CGGGCCGTTG GAATAGATCG CGATACACGG CAGGTGCGTC TGTCGAATGA TGATGCCGTC
AGCTACGGGC GGTTGCTATT GACACCCGGT GCGGAACCGC GACTGCTGGA CATCCCCGGA
CGGGAGCTGG AAGGCGTCTT TTCTCTGCGG ACCGCCGTCG ACGCCTGCGG CCTGTCCGGG
CAGTTGCTGC CCGGTGCGGA TGTCGTCATC GTCGGCGGTG GACTGATCGG CCTCGAGGTG
GCAGCCAGTG CGATCCAGCG AGGTTGCAGT GTCACCGTGA TCGAGGCGGG ACCGCGGCTG
ATGACGCGCG CGGTGCCGCC GGAACTTGCC GAACTGATCC GGCTGCTGCA CGAAACGCGC
GGCGTGCGCT TCATTCTGGG GCGCCAGGCG GTCGCGCTGC TGGGGTCGCA GCGGATCGAG
GCGCTGCGTA TGGACGATGG GAGCACGCTG GCATGCACCG CGGCGCTGAT CTCGATCGGC
GTTACGCCGA GAACCGATCT GGCGCTTGCC GCAGGCCTCG AGATTGAAAA CGGGATCGCC
GTGGACTGCT TCCTGAAAAC GTCCGATCCT TTCATCTATG CGGCTGGCGA TGCCTGTGCC
TTCAAGAATG GCGATGGCTC GAGATTGCGT CTGGAATGCT GGAAGAACGC CGAAGATCAG
GGCGCGTTGG CCGCTCGCAA CATGATGGGG GCAAACGAGC CCTATACGCC CATGCCTTGG
ATGTGGTCGG ATCAGTACGA CCGGACGATG CAGATCGCCG GGCATCCCGA GCTCGGCGAG
CAGCATGTGG CACGCCACTG CCCGGACGGC TCTTTGCTGG TCTATCATCT TGACGCAAAC
GACGCGATCG TCGGCGTCAG CGGCTTCGGG TCTCTCCGCG AGATCGCCCG GGGCGTGCGC
ACCGGACAGA TGCTGATGCA GCGGGGCATT CACCCGGCGA AAGAGGCTCT GCAAAACCCG
AAAATCGACC TCAAGGCCGC GGCTAAGGTG GCAGCAGGCT GA
 
Protein sequence
MPHDGIVIVG SGHAGARAAQ SLRANGWQHR ISVIDGEGCA PYERPPLSKA VLSGKSRPED 
AVLFPQDFVE QHGIDFRSGV RAVGIDRDTR QVRLSNDDAV SYGRLLLTPG AEPRLLDIPG
RELEGVFSLR TAVDACGLSG QLLPGADVVI VGGGLIGLEV AASAIQRGCS VTVIEAGPRL
MTRAVPPELA ELIRLLHETR GVRFILGRQA VALLGSQRIE ALRMDDGSTL ACTAALISIG
VTPRTDLALA AGLEIENGIA VDCFLKTSDP FIYAAGDACA FKNGDGSRLR LECWKNAEDQ
GALAARNMMG ANEPYTPMPW MWSDQYDRTM QIAGHPELGE QHVARHCPDG SLLVYHLDAN
DAIVGVSGFG SLREIARGVR TGQMLMQRGI HPAKEALQNP KIDLKAAAKV AAG