Gene Smed_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0903 
Symbol 
ID5321744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp974736 
End bp976178 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content61% 
IMG OID640789843 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_001326593 
Protein GI150396126 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTG AAACCCTTAT TGCCAGCCTG CAACTTTCGA TGCCCGAGCT GATCCTTGCG 
GTCGGCGCGA TGGCGCTCCT GATGATCGGC GTCTTCTCGA GCGAAAGAGC CACCCCGACC
GTGACCGGGC TTGCGGTCGC GGTGCTCATC ATCGCCGGGC TGTGGCTCGT GCTGAAGACG
GGCGAGGGGG CGGCTTATGG CGGCGCCTTC CTGTCCGATC CCTTCGCCAA ATTCATGAAA
GTGCTCGCTC TCATCGGTTC GATCACAGTG ATGGTGATGA CCGTCGGTCA CGCGCGTTCG
GCTCAGATCG ACCGGTTTGA ATTTCCGGTG CTTCTGGTTC TCGCCACGCT CGGCATGCTG
CTGATGATTT CGGCCAACGA TCTCATCTCG CTCTACCTGT CGCTGGAACT GCAGTCGCTT
GCGCTTTACG TCGTGGCTGC GATCAACCGC GACAGCGTCC GGTCGACCGA AGCGGGTCTG
AAATATTTCG TTCTCGGCGC ACTCTCTTCG GGGATGCTGC TTTACGGCAT GTCGCTCGTC
TACGGCTTCA CCGGCCATAC AGGGTTTGAC GAGATTGCGG CGGCGCTGAC CGCCGAGGGC
CGTTCTCTCG GCCTCGTCTT CGGGCTGGTG TTCATCCTTG CGGGCCTCGC TTTCAAGATC
TCCGCCGTGC CGTTTCATAT GTGGACGCCT GACGTCTACG AGGGCGCCCC GACGCCGGTG
ACGGCATTCT TTGCCGCCGG ACCCAAGATC GCGGCCATCT CAATCCTCGT TCGCATCGTC
ATCAATGCCT TCGAACCCGT CGTCGCCGAC TGGCAGCAGA TCGTCGTCTT CATTTCGATC
GCTTCGATGC TGCTCGGCTC CTTCGCCGCG ATCGGTCAGC GCAACATCAA GCGGCTGATG
GCGTACTCGT CGATCGGCCA TATGGGTTAT GCGCTGGTCG GCCTTGCTGC CGGTTCGATG
GCCGGCGTAC GCGGCGTGAT CCTTTATATG CTGATCTACA TGGTCATGAC GTTGGGCACC
TTCGCCTGCA TCCTCGCCAT GCGCCGCAGG GAGGGCGAGC ATGTCGAGGG CATCGACGAT
CTCGCCGGTC TTTCGCAGAC CAACCCTTTC ATGGCGACGG TGCTGACGAT CCTCATGTTC
TCGCTTGCCG GCATCCCGCC ACTTGCAGGG TTCTTCGGTA AGTACTTCGT CTTCGTGGCC
GCGATCGAGG CGCATCTCTA TGCATTGGCG ATTATCGGCG TGCTCGCTTC CGTCGTCGGC
GCTTACTATT ATCTGCGGGT CATCAAGGTG ATGTGGTTCG AGGAGCCCAG AGGCGAGTTT
GCCCGGACGG CGGGTGAGCT TCGGCTGGTG TTCGGCCTGT CGGGCCTCTT CGTGCTCGGC
TATGTGCTCA TCGGCGGCCC GCTTGGAAGC GCGGCCGAAG CTGCGGCACG GACCTTCTTT
TGA
 
Protein sequence
MTAETLIASL QLSMPELILA VGAMALLMIG VFSSERATPT VTGLAVAVLI IAGLWLVLKT 
GEGAAYGGAF LSDPFAKFMK VLALIGSITV MVMTVGHARS AQIDRFEFPV LLVLATLGML
LMISANDLIS LYLSLELQSL ALYVVAAINR DSVRSTEAGL KYFVLGALSS GMLLYGMSLV
YGFTGHTGFD EIAAALTAEG RSLGLVFGLV FILAGLAFKI SAVPFHMWTP DVYEGAPTPV
TAFFAAGPKI AAISILVRIV INAFEPVVAD WQQIVVFISI ASMLLGSFAA IGQRNIKRLM
AYSSIGHMGY ALVGLAAGSM AGVRGVILYM LIYMVMTLGT FACILAMRRR EGEHVEGIDD
LAGLSQTNPF MATVLTILMF SLAGIPPLAG FFGKYFVFVA AIEAHLYALA IIGVLASVVG
AYYYLRVIKV MWFEEPRGEF ARTAGELRLV FGLSGLFVLG YVLIGGPLGS AAEAAARTFF