Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0899 |
Symbol | |
ID | 5321740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 970197 |
End bp | 970865 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789839 |
Product | NADH dehydrogenase subunit J |
Protein accession | YP_001326589 |
Protein GI | 150396122 |
COG category | [C] Energy production and conversion |
COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0144651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGCG GGCATGCGTG CCTCCACGCC AGCAAGACGA AAAAGGCACC GATCATGGGT CTGCAGGCTC TTTTTTTCTA TCTCTTTGCC TTCATCGCGG TAGCGTCGGC ATTTATGGTC ATCGCGGCCA AGAACCCCGT CTATTCGGTT CTGTTCCTGA TCCTGACCTT CTTCAACGCG GCTGGACTGT TCCTGCTGAC AGGCGCCGAG TTCCTGGCGA TGATCCTGCT GGTGGTCTAT GTCGGGGCCG TCGCGGTTCT CTTCCTCTTC GTCGTCATGA TGCTCGATAT CGACTTCGCC GAACTGCGTG CCGGCGTTCT CGAATATGCG CCGATCGGCG CGCTGATCGG GATGATCCTC GCTGCCGAGC TGATCGTCGT CGCCGGCGGC TGGGCCTTCT CGCCGGAGAT AGCTAAAGGT ATAGCAATGC CGATACCGGC GCCCAGCGAG CGCACCAATA CCGCAGCGCT CGGCGATGTC CTCTATACCC ACTACGTCTA TTTCTTCCAG ATCGCAGGGC TCGTGCTGCT CGTCGCCATG ATCGGCGCCA TCGTGCTCAC CCTGCGTCAC CGTCAGAACA TCAAGCGTCA GAGCATTCCG CAGCAGGTTG CCCGCACCCC CGAGACCGCC GTCGAGGTGG TCACGGTCAA GCCGGGGCAG GGCATCTAA
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Protein sequence | MECGHACLHA SKTKKAPIMG LQALFFYLFA FIAVASAFMV IAAKNPVYSV LFLILTFFNA AGLFLLTGAE FLAMILLVVY VGAVAVLFLF VVMMLDIDFA ELRAGVLEYA PIGALIGMIL AAELIVVAGG WAFSPEIAKG IAMPIPAPSE RTNTAALGDV LYTHYVYFFQ IAGLVLLVAM IGAIVLTLRH RQNIKRQSIP QQVARTPETA VEVVTVKPGQ GI
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